Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 FAM197Y7-201ENST00000432892 766 ntBASIC13.76□□□□□ -0.21
RNF144AP50876 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF144AP50876 AC092473.1-201ENST00000441098 221 ntBASIC13.76□□□□□ -0.21
RNF144AP50876 COX20P2-201ENST00000452636 358 ntBASIC13.76□□□□□ -0.21
RNF144AP50876 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 FTH1P14-201ENST00000482930 551 ntBASIC13.76□□□□□ -0.21
RNF144AP50876 AC022447.6-201ENST00000515522 438 ntBASIC13.76□□□□□ -0.21
RNF144AP50876 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 AC006518.1-201ENST00000541449 943 ntBASIC13.76□□□□□ -0.21
RNF144AP50876 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF144AP50876 AP000240.1-201ENST00000609910 452 ntBASIC13.76□□□□□ -0.21
RNF144AP50876 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RNF144AP50876 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RNF144AP50876 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RNF144AP50876 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RNF144AP50876 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RNF144AP50876 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF144AP50876 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 AC007969.1-201ENST00000433675 447 ntBASIC13.75□□□□□ -0.21
RNF144AP50876 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.75□□□□□ -0.21
RNF144AP50876 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.75□□□□□ -0.21
RNF144AP50876 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF144AP50876 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF144AP50876 ENPP7P14-201ENST00000621765 1040 ntBASIC13.75□□□□□ -0.21
RNF144AP50876 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF144AP50876 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF144AP50876 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RNF144AP50876 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF144AP50876 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF144AP50876 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF144AP50876 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF144AP50876 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF144AP50876 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF144AP50876 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RNF144AP50876 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
RNF144AP50876 AC131212.3-201ENST00000624087 4219 ntBASIC13.74□□□□□ -0.21
RNF144AP50876 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF144AP50876 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms