Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC087481.3-201ENST00000602886 1894 ntBASIC16.13■□□□□ 0.17
CDK7P50613 AC023157.3-201ENST00000619086 2088 ntBASIC16.13■□□□□ 0.17
CDK7P50613 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDK7P50613 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDK7P50613 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 TMBIM7P-203ENST00000641617 1718 ntBASIC16.13■□□□□ 0.17
CDK7P50613 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CDK7P50613 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.13■□□□□ 0.17
CDK7P50613 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.13■□□□□ 0.17
CDK7P50613 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK7P50613 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDK7P50613 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.12■□□□□ 0.17
CDK7P50613 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 SSR4P1-203ENST00000599569 2260 ntBASIC16.12■□□□□ 0.17
CDK7P50613 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDK7P50613 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDK7P50613 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.12■□□□□ 0.17
CDK7P50613 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.12■□□□□ 0.17
CDK7P50613 PKD1P5-201ENST00000532415 10291 ntBASIC16.12■□□□□ 0.17
CDK7P50613 AC063926.3-201ENST00000624734 5658 ntBASIC16.12■□□□□ 0.17
CDK7P50613 KRT17P5-201ENST00000332088 839 ntBASIC16.12■□□□□ 0.17
CDK7P50613 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.12■□□□□ 0.17
CDK7P50613 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.12■□□□□ 0.17
CDK7P50613 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.12■□□□□ 0.17
CDK7P50613 AC004837.1-201ENST00000446267 564 ntBASIC16.12■□□□□ 0.17
CDK7P50613 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.12■□□□□ 0.17
CDK7P50613 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.12■□□□□ 0.17
CDK7P50613 ALG1L13P-202ENST00000519320 584 ntBASIC16.12■□□□□ 0.17
CDK7P50613 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.12■□□□□ 0.17
CDK7P50613 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.12■□□□□ 0.17
CDK7P50613 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.12■□□□□ 0.17
CDK7P50613 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.12■□□□□ 0.17
CDK7P50613 AC138466.5-201ENST00000624002 808 ntBASIC16.12■□□□□ 0.17
CDK7P50613 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 AC138035.3-201ENST00000622706 2791 ntBASIC16.12■□□□□ 0.17
CDK7P50613 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 MROH4P-201ENST00000431302 1578 ntBASIC16.12■□□□□ 0.17
CDK7P50613 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 AL590440.2-201ENST00000641973 1595 ntBASIC16.12■□□□□ 0.17
CDK7P50613 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDK7P50613 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDK7P50613 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDK7P50613 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK7P50613 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.11■□□□□ 0.17
CDK7P50613 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDK7P50613 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDK7P50613 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.11■□□□□ 0.17
CDK7P50613 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.11■□□□□ 0.17
CDK7P50613 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.11■□□□□ 0.17
CDK7P50613 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.11■□□□□ 0.17
CDK7P50613 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.11■□□□□ 0.17
CDK7P50613 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDK7P50613 AC138466.4-201ENST00000623965 852 ntBASIC16.11■□□□□ 0.17
CDK7P50613 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.11■□□□□ 0.17
CDK7P50613 KRT8P28-201ENST00000433288 1390 ntBASIC16.11■□□□□ 0.17
CDK7P50613 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms