Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 AL136309.1-201ENST00000403917 691 ntBASIC13.12□□□□□ -0.31
CSNK1A1P48729 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 AC112492.5-201ENST00000421897 457 ntBASIC13.12□□□□□ -0.31
CSNK1A1P48729 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 CTBP2P5-201ENST00000454986 1264 ntBASIC13.12□□□□□ -0.31
CSNK1A1P48729 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 AP003171.2-201ENST00000528208 925 ntBASIC13.12□□□□□ -0.31
CSNK1A1P48729 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 DMBT1P1-203ENST00000636837 4628 ntBASIC13.12□□□□□ -0.31
CSNK1A1P48729 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 MYADML-201ENST00000474610 2147 ntBASIC13.12□□□□□ -0.31
CSNK1A1P48729 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 MIR4683-201ENST00000579659 81 ntBASIC13.11□□□□□ -0.31
CSNK1A1P48729 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 AC073413.1-201ENST00000603927 732 ntBASIC13.11□□□□□ -0.31
CSNK1A1P48729 AL512343.1-201ENST00000605837 169 ntBASIC13.11□□□□□ -0.31
CSNK1A1P48729 ZACNP1-201ENST00000612259 710 ntBASIC13.11□□□□□ -0.31
CSNK1A1P48729 AP001002.3-201ENST00000623482 206 ntBASIC13.11□□□□□ -0.31
CSNK1A1P48729 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms