Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT6CP48668 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KRT6CP48668 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT6CP48668 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KRT6CP48668 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
KRT6CP48668 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
KRT6CP48668 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 BEND3P1-201ENST00000421591 1944 ntBASIC14.31□□□□□ -0.12
KRT6CP48668 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
KRT6CP48668 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
KRT6CP48668 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
KRT6CP48668 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
KRT6CP48668 RN7SKP230-201ENST00000365642 335 ntBASIC14.31□□□□□ -0.12
KRT6CP48668 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 TERF1P3-201ENST00000505638 1227 ntBASIC14.31□□□□□ -0.12
KRT6CP48668 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.31□□□□□ -0.12
KRT6CP48668 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.31□□□□□ -0.12
KRT6CP48668 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.31□□□□□ -0.12
KRT6CP48668 RN7SL48P-201ENST00000579283 293 ntBASIC14.31□□□□□ -0.12
KRT6CP48668 AC145423.3-201ENST00000615987 467 ntBASIC14.31□□□□□ -0.12
KRT6CP48668 ENPP7P14-201ENST00000621765 1040 ntBASIC14.31□□□□□ -0.12
KRT6CP48668 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 CLUHP2-201ENST00000426660 1303 ntBASIC14.31□□□□□ -0.12
KRT6CP48668 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 RN7SL832P-201ENST00000607781 1756 ntBASIC14.31□□□□□ -0.12
KRT6CP48668 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
KRT6CP48668 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
KRT6CP48668 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRT6CP48668 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.31□□□□□ -0.12
KRT6CP48668 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.3□□□□□ -0.12
KRT6CP48668 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
KRT6CP48668 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
KRT6CP48668 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6CP48668 INE2-201ENST00000630399 1874 ntBASIC14.3□□□□□ -0.12
KRT6CP48668 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
KRT6CP48668 ACTG1P3-201ENST00000431775 1114 ntBASIC14.3□□□□□ -0.12
KRT6CP48668 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6CP48668 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6CP48668 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.3□□□□□ -0.12
KRT6CP48668 FTLP10-202ENST00000505798 471 ntBASIC14.3□□□□□ -0.12
KRT6CP48668 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.3□□□□□ -0.12
KRT6CP48668 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 MIR4745-201ENST00000577608 62 ntBASIC14.3□□□□□ -0.12
KRT6CP48668 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6CP48668 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.3□□□□□ -0.12
KRT6CP48668 AC138466.3-201ENST00000619983 221 ntBASIC14.3□□□□□ -0.12
KRT6CP48668 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
KRT6CP48668 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
KRT6CP48668 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
KRT6CP48668 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
KRT6CP48668 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6CP48668 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6CP48668 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.3□□□□□ -0.12
KRT6CP48668 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms