Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC16.27■□□□□ 0.2
TM4SF4P48230 SORD2P-201ENST00000558556 1069 ntBASIC16.27■□□□□ 0.2
TM4SF4P48230 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.27■□□□□ 0.2
TM4SF4P48230 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TM4SF4P48230 AC026336.4-201ENST00000624565 1050 ntBASIC16.27■□□□□ 0.2
TM4SF4P48230 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC16.27■□□□□ 0.2
TM4SF4P48230 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM4SF4P48230 PKD1P1-201ENST00000458669 6805 ntBASIC16.27■□□□□ 0.2
TM4SF4P48230 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
TM4SF4P48230 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM4SF4P48230 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.27■□□□□ 0.19
TM4SF4P48230 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.27■□□□□ 0.19
TM4SF4P48230 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
TM4SF4P48230 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM4SF4P48230 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM4SF4P48230 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM4SF4P48230 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TM4SF4P48230 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TM4SF4P48230 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM4SF4P48230 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM4SF4P48230 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM4SF4P48230 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TM4SF4P48230 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TM4SF4P48230 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TM4SF4P48230 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
TM4SF4P48230 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.26■□□□□ 0.19
TM4SF4P48230 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TM4SF4P48230 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 FAU-201ENST00000279259 461 ntTSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 AC133141.1-201ENST00000443015 339 ntBASIC16.26■□□□□ 0.19
TM4SF4P48230 KRT19P4-201ENST00000443208 943 ntBASIC16.26■□□□□ 0.19
TM4SF4P48230 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC16.26■□□□□ 0.19
TM4SF4P48230 RN7SL578P-201ENST00000477781 283 ntBASIC16.26■□□□□ 0.19
TM4SF4P48230 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC16.26■□□□□ 0.19
TM4SF4P48230 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC16.26■□□□□ 0.19
TM4SF4P48230 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.26■□□□□ 0.19
TM4SF4P48230 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC16.26■□□□□ 0.19
TM4SF4P48230 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 RN7SL524P-201ENST00000581152 300 ntBASIC16.26■□□□□ 0.19
TM4SF4P48230 AC016582.2-202ENST00000587765 1094 ntBASIC16.26■□□□□ 0.19
TM4SF4P48230 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC16.26■□□□□ 0.19
TM4SF4P48230 AC010531.8-201ENST00000623341 685 ntBASIC16.26■□□□□ 0.19
TM4SF4P48230 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.26■□□□□ 0.19
TM4SF4P48230 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TM4SF4P48230 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.26■□□□□ 0.19
TM4SF4P48230 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.26■□□□□ 0.19
TM4SF4P48230 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TM4SF4P48230 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TM4SF4P48230 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM4SF4P48230 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM4SF4P48230 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM4SF4P48230 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.25■□□□□ 0.19
TM4SF4P48230 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM4SF4P48230 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM4SF4P48230 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM4SF4P48230 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.25■□□□□ 0.19
TM4SF4P48230 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TM4SF4P48230 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM4SF4P48230 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.25■□□□□ 0.19
TM4SF4P48230 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM4SF4P48230 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM4SF4P48230 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TM4SF4P48230 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.25■□□□□ 0.19
TM4SF4P48230 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC16.25■□□□□ 0.19
TM4SF4P48230 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC16.25■□□□□ 0.19
TM4SF4P48230 MED15P3-201ENST00000413613 326 ntBASIC16.25■□□□□ 0.19
TM4SF4P48230 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.25■□□□□ 0.19
TM4SF4P48230 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TM4SF4P48230 IGKV1OR-2-201ENST00000457995 350 ntBASIC16.25■□□□□ 0.19
TM4SF4P48230 RN7SL351P-201ENST00000469306 248 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms