Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.85□□□□□ -0.19
GABRA4P48169 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GABRA4P48169 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.85□□□□□ -0.19
GABRA4P48169 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.85□□□□□ -0.19
GABRA4P48169 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.84□□□□□ -0.19
GABRA4P48169 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.84□□□□□ -0.19
GABRA4P48169 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
GABRA4P48169 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.84□□□□□ -0.19
GABRA4P48169 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 LINC01165-201ENST00000445190 1623 ntBASIC13.84□□□□□ -0.19
GABRA4P48169 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
GABRA4P48169 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.84□□□□□ -0.19
GABRA4P48169 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.84□□□□□ -0.19
GABRA4P48169 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.84□□□□□ -0.19
GABRA4P48169 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.84□□□□□ -0.19
GABRA4P48169 IMP3P2-201ENST00000489760 475 ntBASIC13.84□□□□□ -0.19
GABRA4P48169 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 RHOQP1-201ENST00000555758 579 ntBASIC13.84□□□□□ -0.19
GABRA4P48169 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.84□□□□□ -0.19
GABRA4P48169 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 MIR3188-201ENST00000583494 85 ntBASIC13.84□□□□□ -0.19
GABRA4P48169 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.84□□□□□ -0.19
GABRA4P48169 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.84□□□□□ -0.19
GABRA4P48169 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
GABRA4P48169 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.84□□□□□ -0.19
GABRA4P48169 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GABRA4P48169 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GABRA4P48169 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GABRA4P48169 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABRA4P48169 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.83□□□□□ -0.19
GABRA4P48169 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
GABRA4P48169 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
GABRA4P48169 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
GABRA4P48169 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.83□□□□□ -0.19
GABRA4P48169 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
GABRA4P48169 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
GABRA4P48169 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
GABRA4P48169 AL390755.1-201ENST00000623716 2027 ntBASIC13.83□□□□□ -0.2
GABRA4P48169 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
GABRA4P48169 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.83□□□□□ -0.2
GABRA4P48169 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
GABRA4P48169 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
GABRA4P48169 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.83□□□□□ -0.2
GABRA4P48169 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.83□□□□□ -0.2
GABRA4P48169 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.83□□□□□ -0.2
GABRA4P48169 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.83□□□□□ -0.2
GABRA4P48169 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.83□□□□□ -0.2
GABRA4P48169 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 AL161932.2-201ENST00000435436 679 ntBASIC13.83□□□□□ -0.2
GABRA4P48169 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.83□□□□□ -0.2
GABRA4P48169 AC006335.1-201ENST00000445200 547 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms