Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTTP42858 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTTP42858 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HTTP42858 AC064801.2-201ENST00000625052 1303 ntBASIC15.9■□□□□ 0.14
HTTP42858 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.9■□□□□ 0.14
HTTP42858 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.9■□□□□ 0.14
HTTP42858 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTTP42858 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.9■□□□□ 0.14
HTTP42858 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.9■□□□□ 0.14
HTTP42858 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.9■□□□□ 0.14
HTTP42858 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HTTP42858 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC15.9■□□□□ 0.14
HTTP42858 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HTTP42858 AC015912.3-201ENST00000619432 348 ntBASIC15.9■□□□□ 0.14
HTTP42858 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.9■□□□□ 0.14
HTTP42858 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.89■□□□□ 0.14
HTTP42858 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
HTTP42858 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
HTTP42858 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
HTTP42858 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.89■□□□□ 0.13
HTTP42858 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.89■□□□□ 0.13
HTTP42858 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 AC000077.1-201ENST00000420012 953 ntBASIC15.89■□□□□ 0.13
HTTP42858 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC15.89■□□□□ 0.13
HTTP42858 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC15.89■□□□□ 0.13
HTTP42858 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC15.89■□□□□ 0.13
HTTP42858 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 CLPP-205ENST00000596605 646 ntTSL 2 BASIC15.89■□□□□ 0.13
HTTP42858 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
HTTP42858 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.89■□□□□ 0.13
HTTP42858 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 AC015909.5-201ENST00000624336 2266 ntBASIC15.89■□□□□ 0.13
HTTP42858 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HTTP42858 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HTTP42858 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.89■□□□□ 0.13
HTTP42858 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC15.89■□□□□ 0.13
HTTP42858 AL359092.2-201ENST00000423330 585 ntBASIC15.89■□□□□ 0.13
HTTP42858 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HTTP42858 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.89■□□□□ 0.13
HTTP42858 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.89■□□□□ 0.13
HTTP42858 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.89■□□□□ 0.13
HTTP42858 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.89■□□□□ 0.13
HTTP42858 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTTP42858 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HTTP42858 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
HTTP42858 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
HTTP42858 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.88■□□□□ 0.13
HTTP42858 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 AL137244.1-201ENST00000422931 865 ntBASIC15.88■□□□□ 0.13
HTTP42858 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC15.88■□□□□ 0.13
HTTP42858 AL359219.1-201ENST00000556311 934 ntBASIC15.88■□□□□ 0.13
HTTP42858 GRAMD4P6-201ENST00000556999 244 ntBASIC15.88■□□□□ 0.13
HTTP42858 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.88■□□□□ 0.13
HTTP42858 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HTTP42858 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC15.88■□□□□ 0.13
HTTP42858 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.88■□□□□ 0.13
HTTP42858 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC15.88■□□□□ 0.13
HTTP42858 CCT8L1P-201ENST00000465400 1674 ntBASIC15.88■□□□□ 0.13
HTTP42858 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.88■□□□□ 0.13
HTTP42858 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HTTP42858 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC15.88■□□□□ 0.13
HTTP42858 HMGA1P2-201ENST00000430198 324 ntBASIC15.88■□□□□ 0.13
HTTP42858 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.88■□□□□ 0.13
HTTP42858 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC15.88■□□□□ 0.13
HTTP42858 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.88■□□□□ 0.13
HTTP42858 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC15.88■□□□□ 0.13
HTTP42858 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.88■□□□□ 0.13
HTTP42858 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HTTP42858 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HTTP42858 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.88■□□□□ 0.13
HTTP42858 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 AL008638.4-201ENST00000624792 1315 ntBASIC15.88■□□□□ 0.13
HTTP42858 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms