Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
KRT2P35908 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT2P35908 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT2P35908 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT2P35908 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT2P35908 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT2P35908 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT2P35908 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KRT2P35908 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT2P35908 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT2P35908 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT2P35908 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KRT2P35908 EEF1DP1-201ENST00000585891 896 ntBASIC16.82■□□□□ 0.28
KRT2P35908 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT2P35908 AC244157.2-201ENST00000616239 1006 ntBASIC16.82■□□□□ 0.28
KRT2P35908 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT2P35908 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT2P35908 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT2P35908 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT2P35908 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT2P35908 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT2P35908 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT2P35908 AC020910.6-201ENST00000623084 1459 ntBASIC16.81■□□□□ 0.28
KRT2P35908 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT2P35908 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KRT2P35908 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT2P35908 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
KRT2P35908 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT2P35908 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT2P35908 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.81■□□□□ 0.28
KRT2P35908 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT2P35908 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.81■□□□□ 0.28
KRT2P35908 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.81■□□□□ 0.28
KRT2P35908 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT2P35908 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT2P35908 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT2P35908 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT2P35908 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT2P35908 AC009955.4-201ENST00000597192 544 ntBASIC16.81■□□□□ 0.28
KRT2P35908 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT2P35908 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
KRT2P35908 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KRT2P35908 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
KRT2P35908 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT2P35908 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT2P35908 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT2P35908 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT2P35908 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT2P35908 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT2P35908 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT2P35908 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT2P35908 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT2P35908 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT2P35908 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
KRT2P35908 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT2P35908 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT2P35908 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT2P35908 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT2P35908 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT2P35908 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT2P35908 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT2P35908 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KRT2P35908 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT2P35908 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms