Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.12□□□□□ -0.31
HOXC12P31275 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
HOXC12P31275 MESTP3-201ENST00000503460 968 ntBASIC13.12□□□□□ -0.31
HOXC12P31275 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.12□□□□□ -0.31
HOXC12P31275 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.12□□□□□ -0.31
HOXC12P31275 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.12□□□□□ -0.31
HOXC12P31275 CHMP4BP1-201ENST00000556017 588 ntBASIC13.12□□□□□ -0.31
HOXC12P31275 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
HOXC12P31275 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.12□□□□□ -0.31
HOXC12P31275 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HOXC12P31275 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.12□□□□□ -0.31
HOXC12P31275 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.12□□□□□ -0.31
HOXC12P31275 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.12□□□□□ -0.31
HOXC12P31275 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.12□□□□□ -0.31
HOXC12P31275 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.12□□□□□ -0.31
HOXC12P31275 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.12□□□□□ -0.31
HOXC12P31275 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.12□□□□□ -0.31
HOXC12P31275 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
HOXC12P31275 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.12□□□□□ -0.31
HOXC12P31275 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
HOXC12P31275 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.12□□□□□ -0.31
HOXC12P31275 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
HOXC12P31275 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.12□□□□□ -0.31
HOXC12P31275 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
HOXC12P31275 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.12□□□□□ -0.31
HOXC12P31275 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.12□□□□□ -0.31
HOXC12P31275 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.12□□□□□ -0.31
HOXC12P31275 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
HOXC12P31275 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
HOXC12P31275 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HOXC12P31275 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.11□□□□□ -0.31
HOXC12P31275 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.11□□□□□ -0.31
HOXC12P31275 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HOXC12P31275 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 AC091951.1-201ENST00000512854 2465 ntBASIC13.11□□□□□ -0.31
HOXC12P31275 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.11□□□□□ -0.31
HOXC12P31275 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 AL136309.1-201ENST00000403917 691 ntBASIC13.11□□□□□ -0.31
HOXC12P31275 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.11□□□□□ -0.31
HOXC12P31275 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.11□□□□□ -0.31
HOXC12P31275 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.11□□□□□ -0.31
HOXC12P31275 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.11□□□□□ -0.31
HOXC12P31275 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.11□□□□□ -0.31
HOXC12P31275 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.11□□□□□ -0.31
HOXC12P31275 AC106820.3-201ENST00000561653 397 ntBASIC13.11□□□□□ -0.31
HOXC12P31275 PPY2P-201ENST00000582808 702 ntBASIC13.11□□□□□ -0.31
HOXC12P31275 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.11□□□□□ -0.31
HOXC12P31275 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.11□□□□□ -0.31
HOXC12P31275 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.11□□□□□ -0.31
HOXC12P31275 AL096828.3-201ENST00000615354 462 ntBASIC13.11□□□□□ -0.31
HOXC12P31275 AL589935.2-201ENST00000616471 1231 ntBASIC13.11□□□□□ -0.31
HOXC12P31275 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.11□□□□□ -0.31
HOXC12P31275 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
HOXC12P31275 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HOXC12P31275 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.11□□□□□ -0.31
HOXC12P31275 AGAP7P-201ENST00000582299 2062 ntBASIC13.11□□□□□ -0.31
HOXC12P31275 AGAP14-201ENST00000624701 2060 ntBASIC13.11□□□□□ -0.31
HOXC12P31275 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HOXC12P31275 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.11□□□□□ -0.31
HOXC12P31275 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.11□□□□□ -0.31
HOXC12P31275 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HOXC12P31275 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HOXC12P31275 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HOXC12P31275 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HOXC12P31275 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HOXC12P31275 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms