Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ATP6V0CP27449 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.79□□□□□ -0.52
ATP6V0CP27449 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ATP6V0CP27449 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ATP6V0CP27449 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ATP6V0CP27449 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ATP6V0CP27449 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ATP6V0CP27449 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ATP6V0CP27449 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
ATP6V0CP27449 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 DLX4-206ENST00000611342 1662 ntBASIC11.78□□□□□ -0.52
ATP6V0CP27449 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.78□□□□□ -0.52
ATP6V0CP27449 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 AC136604.1-202ENST00000425471 771 ntBASIC11.78□□□□□ -0.52
ATP6V0CP27449 UPK3BP1-201ENST00000428678 509 ntBASIC11.78□□□□□ -0.52
ATP6V0CP27449 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 AC093909.1-201ENST00000504731 1122 ntBASIC11.78□□□□□ -0.52
ATP6V0CP27449 KRT8P48-201ENST00000515599 1220 ntBASIC11.78□□□□□ -0.52
ATP6V0CP27449 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 LINC00628-201ENST00000628516 1289 ntBASIC11.78□□□□□ -0.52
ATP6V0CP27449 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 CICP1-201ENST00000416803 2410 ntBASIC11.78□□□□□ -0.52
ATP6V0CP27449 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 AL136172.1-201ENST00000598590 1394 ntBASIC11.78□□□□□ -0.52
ATP6V0CP27449 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.78□□□□□ -0.52
ATP6V0CP27449 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ATP6V0CP27449 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ATP6V0CP27449 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ATP6V0CP27449 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ATP6V0CP27449 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
ATP6V0CP27449 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ATP6V0CP27449 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
ATP6V0CP27449 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
ATP6V0CP27449 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ATP6V0CP27449 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ATP6V0CP27449 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ATP6V0CP27449 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ATP6V0CP27449 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
ATP6V0CP27449 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ATP6V0CP27449 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ATP6V0CP27449 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ATP6V0CP27449 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ATP6V0CP27449 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.77□□□□□ -0.53
ATP6V0CP27449 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ATP6V0CP27449 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.77□□□□□ -0.53
ATP6V0CP27449 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
ATP6V0CP27449 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.77□□□□□ -0.53
ATP6V0CP27449 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
ATP6V0CP27449 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ATP6V0CP27449 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.77□□□□□ -0.53
ATP6V0CP27449 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ATP6V0CP27449 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms