Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNA3P22001 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNA3P22001 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
KCNA3P22001 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNA3P22001 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
KCNA3P22001 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
KCNA3P22001 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNA3P22001 AC008536.3-201ENST00000623282 1599 ntBASIC17.62■□□□□ 0.41
KCNA3P22001 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA3P22001 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.61■□□□□ 0.41
KCNA3P22001 AL365181.1-201ENST00000564032 1828 ntBASIC17.61■□□□□ 0.41
KCNA3P22001 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
KCNA3P22001 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 AC006987.1-201ENST00000413610 527 ntBASIC17.61■□□□□ 0.41
KCNA3P22001 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA3P22001 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA3P22001 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 AC025186.1-201ENST00000478174 870 ntBASIC17.61■□□□□ 0.41
KCNA3P22001 PRSS3P1-201ENST00000503996 742 ntBASIC17.61■□□□□ 0.41
KCNA3P22001 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
KCNA3P22001 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC17.61■□□□□ 0.41
KCNA3P22001 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA3P22001 AL136982.5-201ENST00000605222 294 ntBASIC17.61■□□□□ 0.41
KCNA3P22001 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC17.61■□□□□ 0.41
KCNA3P22001 PDXDC2P-206ENST00000534700 1315 ntBASIC17.61■□□□□ 0.41
KCNA3P22001 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
KCNA3P22001 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA3P22001 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA3P22001 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 LAP3P2-201ENST00000454686 1454 ntBASIC17.61■□□□□ 0.41
KCNA3P22001 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA3P22001 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNA3P22001 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNA3P22001 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA3P22001 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
KCNA3P22001 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
KCNA3P22001 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
KCNA3P22001 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA3P22001 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNA3P22001 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
KCNA3P22001 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNA3P22001 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
KCNA3P22001 BX679664.3-201ENST00000414070 555 ntBASIC17.6■□□□□ 0.41
KCNA3P22001 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNA3P22001 AC027612.2-202ENST00000445955 1199 ntBASIC17.6■□□□□ 0.41
KCNA3P22001 AC113935.1-201ENST00000471722 555 ntBASIC17.6■□□□□ 0.41
KCNA3P22001 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA3P22001 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC17.6■□□□□ 0.41
KCNA3P22001 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA3P22001 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA3P22001 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC17.6■□□□□ 0.41
KCNA3P22001 MIR4265-201ENST00000582152 99 ntBASIC17.6■□□□□ 0.41
KCNA3P22001 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNA3P22001 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.6■□□□□ 0.41
KCNA3P22001 AC110057.1-201ENST00000636031 898 ntBASIC17.6■□□□□ 0.41
KCNA3P22001 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNA3P22001 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 KRT8P18-201ENST00000413425 1445 ntBASIC17.6■□□□□ 0.41
KCNA3P22001 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
KCNA3P22001 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
KCNA3P22001 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNA3P22001 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNA3P22001 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNA3P22001 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms