Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 MIR6805-201ENST00000615055 62 ntBASIC14.85□□□□□ -0.03
HLA-DPA1P20036 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AL136301.1-201ENST00000615830 422 ntBASIC14.85□□□□□ -0.03
HLA-DPA1P20036 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 KRT8P28-201ENST00000433288 1390 ntBASIC14.85□□□□□ -0.03
HLA-DPA1P20036 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 AC009093.10-201ENST00000641956 1442 ntBASIC14.84□□□□□ -0.03
HLA-DPA1P20036 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 AC139749.1-202ENST00000617529 3139 ntBASIC14.84□□□□□ -0.03
HLA-DPA1P20036 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 SHC1P1-201ENST00000425230 1745 ntBASIC14.84□□□□□ -0.03
HLA-DPA1P20036 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 SNX29P1-201ENST00000548357 1007 ntBASIC14.84□□□□□ -0.03
HLA-DPA1P20036 AP006547.1-201ENST00000563435 692 ntBASIC14.84□□□□□ -0.03
HLA-DPA1P20036 AP005482.1-201ENST00000563722 1273 ntBASIC14.84□□□□□ -0.03
HLA-DPA1P20036 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 AC027601.3-201ENST00000622907 509 ntBASIC14.84□□□□□ -0.03
HLA-DPA1P20036 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPA1P20036 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.84□□□□□ -0.03
HLA-DPA1P20036 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.83□□□□□ -0.03
HLA-DPA1P20036 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPA1P20036 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPA1P20036 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPA1P20036 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPA1P20036 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPA1P20036 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.83□□□□□ -0.03
HLA-DPA1P20036 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPA1P20036 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.83□□□□□ -0.03
HLA-DPA1P20036 RN7SL832P-201ENST00000607781 1756 ntBASIC14.83□□□□□ -0.03
HLA-DPA1P20036 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPA1P20036 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPA1P20036 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 HIST2H2BB-201ENST00000449108 381 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms