Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 FLJ16779-201ENST00000612722 7638 ntBASIC14.81□□□□□ -0.04
RETP07949 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RETP07949 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 AL512430.1-201ENST00000392575 860 ntBASIC14.81□□□□□ -0.04
RETP07949 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RETP07949 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC14.81□□□□□ -0.04
RETP07949 AL139008.1-201ENST00000437894 228 ntBASIC14.81□□□□□ -0.04
RETP07949 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.81□□□□□ -0.04
RETP07949 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.81□□□□□ -0.04
RETP07949 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.81□□□□□ -0.04
RETP07949 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
RETP07949 AL022344.2-201ENST00000568976 968 ntBASIC14.81□□□□□ -0.04
RETP07949 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RETP07949 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.81□□□□□ -0.04
RETP07949 FO393412.1-201ENST00000619841 382 ntBASIC14.81□□□□□ -0.04
RETP07949 MIR6858-201ENST00000620733 67 ntBASIC14.81□□□□□ -0.04
RETP07949 AC138466.4-201ENST00000623965 852 ntBASIC14.81□□□□□ -0.04
RETP07949 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.81□□□□□ -0.04
RETP07949 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.81□□□□□ -0.04
RETP07949 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.81□□□□□ -0.04
RETP07949 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RETP07949 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RETP07949 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RETP07949 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
RETP07949 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.81□□□□□ -0.04
RETP07949 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.81□□□□□ -0.04
RETP07949 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.81□□□□□ -0.04
RETP07949 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.8□□□□□ -0.04
RETP07949 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
RETP07949 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.8□□□□□ -0.04
RETP07949 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RETP07949 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
RETP07949 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.8□□□□□ -0.04
RETP07949 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.8□□□□□ -0.04
RETP07949 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.8□□□□□ -0.04
RETP07949 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.8□□□□□ -0.04
RETP07949 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.8□□□□□ -0.04
RETP07949 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.8□□□□□ -0.04
RETP07949 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 AP003398.1-201ENST00000531124 318 ntBASIC14.8□□□□□ -0.04
RETP07949 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RETP07949 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.8□□□□□ -0.04
RETP07949 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.8□□□□□ -0.04
RETP07949 AL109837.1-201ENST00000603272 613 ntBASIC14.8□□□□□ -0.04
RETP07949 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 AL008718.2-201ENST00000609206 1313 ntBASIC14.8□□□□□ -0.04
RETP07949 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RETP07949 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RETP07949 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.8□□□□□ -0.04
RETP07949 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.8□□□□□ -0.04
RETP07949 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RETP07949 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RETP07949 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
RETP07949 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RETP07949 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RETP07949 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RETP07949 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms