Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHGBP05060 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHGBP05060 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.53■□□□□ 0.4
CHGBP05060 ST13P19-201ENST00000442505 1124 ntBASIC17.53■□□□□ 0.4
CHGBP05060 AC005077.2-201ENST00000449786 690 ntBASIC17.53■□□□□ 0.4
CHGBP05060 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.53■□□□□ 0.4
CHGBP05060 EIF4HP1-201ENST00000453115 687 ntBASIC17.53■□□□□ 0.4
CHGBP05060 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.53■□□□□ 0.4
CHGBP05060 MARK2P5-201ENST00000507649 634 ntBASIC17.53■□□□□ 0.4
CHGBP05060 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.53■□□□□ 0.4
CHGBP05060 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.53■□□□□ 0.4
CHGBP05060 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.53■□□□□ 0.4
CHGBP05060 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.53■□□□□ 0.4
CHGBP05060 AC027237.1-201ENST00000560942 655 ntBASIC17.53■□□□□ 0.4
CHGBP05060 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.53■□□□□ 0.4
CHGBP05060 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CHGBP05060 AC009884.2-201ENST00000603110 324 ntBASIC17.53■□□□□ 0.4
CHGBP05060 AL157813.1-201ENST00000612996 587 ntBASIC17.53■□□□□ 0.4
CHGBP05060 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHGBP05060 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CHGBP05060 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHGBP05060 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.53■□□□□ 0.4
CHGBP05060 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CHGBP05060 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHGBP05060 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.53■□□□□ 0.4
CHGBP05060 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHGBP05060 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHGBP05060 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CHGBP05060 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CHGBP05060 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CHGBP05060 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CHGBP05060 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CHGBP05060 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
CHGBP05060 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CHGBP05060 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.52■□□□□ 0.4
CHGBP05060 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.52■□□□□ 0.4
CHGBP05060 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.52■□□□□ 0.4
CHGBP05060 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.52■□□□□ 0.4
CHGBP05060 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.52■□□□□ 0.4
CHGBP05060 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CHGBP05060 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CHGBP05060 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHGBP05060 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHGBP05060 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CHGBP05060 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
CHGBP05060 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHGBP05060 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.52■□□□□ 0.39
CHGBP05060 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.52■□□□□ 0.39
CHGBP05060 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHGBP05060 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CHGBP05060 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CHGBP05060 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.52■□□□□ 0.39
CHGBP05060 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.51■□□□□ 0.39
CHGBP05060 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.51■□□□□ 0.39
CHGBP05060 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.51■□□□□ 0.39
CHGBP05060 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CHGBP05060 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CHGBP05060 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.51■□□□□ 0.39
CHGBP05060 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CHGBP05060 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.51■□□□□ 0.39
CHGBP05060 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.51■□□□□ 0.39
CHGBP05060 AL161932.2-201ENST00000435436 679 ntBASIC17.51■□□□□ 0.39
CHGBP05060 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms