Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPNS1P04632 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPNS1P04632 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CAPNS1P04632 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 ACTG1P2-201ENST00000415776 1125 ntBASIC14.66□□□□□ -0.06
CAPNS1P04632 AC136604.1-201ENST00000418535 575 ntBASIC14.66□□□□□ -0.06
CAPNS1P04632 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPNS1P04632 ACTG1P11-201ENST00000425411 1125 ntBASIC14.66□□□□□ -0.06
CAPNS1P04632 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.66□□□□□ -0.06
CAPNS1P04632 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPNS1P04632 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPNS1P04632 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPNS1P04632 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPNS1P04632 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CAPNS1P04632 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CAPNS1P04632 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPNS1P04632 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 AC027612.1-201ENST00000445234 2395 ntBASIC14.65□□□□□ -0.06
CAPNS1P04632 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CAPNS1P04632 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CAPNS1P04632 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.65□□□□□ -0.06
CAPNS1P04632 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.65□□□□□ -0.06
CAPNS1P04632 RPSAP31-201ENST00000416648 895 ntBASIC14.65□□□□□ -0.06
CAPNS1P04632 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CAPNS1P04632 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.65□□□□□ -0.06
CAPNS1P04632 AC012618.1-201ENST00000461223 412 ntBASIC14.65□□□□□ -0.06
CAPNS1P04632 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.65□□□□□ -0.06
CAPNS1P04632 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.65□□□□□ -0.06
CAPNS1P04632 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.65□□□□□ -0.06
CAPNS1P04632 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.65□□□□□ -0.06
CAPNS1P04632 AC135983.4-201ENST00000564116 1262 ntBASIC14.65□□□□□ -0.06
CAPNS1P04632 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.65□□□□□ -0.06
CAPNS1P04632 RN7SL48P-201ENST00000579283 293 ntBASIC14.65□□□□□ -0.06
CAPNS1P04632 ECM1P1-201ENST00000604092 1279 ntBASIC14.65□□□□□ -0.06
CAPNS1P04632 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPNS1P04632 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPNS1P04632 AC022748.3-201ENST00000621828 275 ntBASIC14.65□□□□□ -0.06
CAPNS1P04632 MST1P2-201ENST00000457982 2291 ntBASIC14.65□□□□□ -0.06
CAPNS1P04632 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPNS1P04632 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPNS1P04632 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPNS1P04632 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPNS1P04632 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPNS1P04632 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 AL365209.1-201ENST00000624418 6473 ntBASIC14.65□□□□□ -0.06
CAPNS1P04632 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.65□□□□□ -0.06
CAPNS1P04632 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPNS1P04632 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPNS1P04632 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPNS1P04632 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPNS1P04632 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 CICP20-201ENST00000443330 2801 ntBASIC14.65□□□□□ -0.06
CAPNS1P04632 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPNS1P04632 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CAPNS1P04632 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPNS1P04632 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.64□□□□□ -0.07
CAPNS1P04632 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.64□□□□□ -0.07
CAPNS1P04632 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms