Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.3□□□□□ -0.12
KRT6AP02538 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
KRT6AP02538 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6AP02538 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
KRT6AP02538 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6AP02538 INE2-201ENST00000630399 1874 ntBASIC14.3□□□□□ -0.12
KRT6AP02538 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
KRT6AP02538 ACTG1P3-201ENST00000431775 1114 ntBASIC14.3□□□□□ -0.12
KRT6AP02538 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6AP02538 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6AP02538 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.3□□□□□ -0.12
KRT6AP02538 FTLP10-202ENST00000505798 471 ntBASIC14.3□□□□□ -0.12
KRT6AP02538 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.3□□□□□ -0.12
KRT6AP02538 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 MIR4745-201ENST00000577608 62 ntBASIC14.3□□□□□ -0.12
KRT6AP02538 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6AP02538 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.3□□□□□ -0.12
KRT6AP02538 AC138466.3-201ENST00000619983 221 ntBASIC14.3□□□□□ -0.12
KRT6AP02538 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
KRT6AP02538 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
KRT6AP02538 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
KRT6AP02538 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
KRT6AP02538 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.3□□□□□ -0.12
KRT6AP02538 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.3□□□□□ -0.12
KRT6AP02538 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
KRT6AP02538 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.3□□□□□ -0.12
KRT6AP02538 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRT6AP02538 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
KRT6AP02538 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KRT6AP02538 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
KRT6AP02538 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.29□□□□□ -0.12
KRT6AP02538 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KRT6AP02538 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT6AP02538 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
KRT6AP02538 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT6AP02538 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
KRT6AP02538 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT6AP02538 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.29□□□□□ -0.12
KRT6AP02538 POM121L8P-201ENST00000417732 1281 ntBASIC14.29□□□□□ -0.12
KRT6AP02538 POM121L9P-203ENST00000441984 1285 ntBASIC14.29□□□□□ -0.12
KRT6AP02538 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT6AP02538 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.29□□□□□ -0.12
KRT6AP02538 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KRT6AP02538 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.29□□□□□ -0.12
KRT6AP02538 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.29□□□□□ -0.12
KRT6AP02538 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KRT6AP02538 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.29□□□□□ -0.12
KRT6AP02538 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT6AP02538 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 FKBP4P6-201ENST00000457486 1332 ntBASIC14.29□□□□□ -0.12
KRT6AP02538 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KRT6AP02538 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT6AP02538 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.29□□□□□ -0.12
KRT6AP02538 AC215219.1-201ENST00000400706 1817 ntBASIC14.29□□□□□ -0.12
KRT6AP02538 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.29□□□□□ -0.12
KRT6AP02538 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRT6AP02538 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KRT6AP02538 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
KRT6AP02538 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6AP02538 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms