Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TIMP1P01033 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TIMP1P01033 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.55■□□□□ 0.08
TIMP1P01033 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TIMP1P01033 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TIMP1P01033 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC15.55■□□□□ 0.08
TIMP1P01033 AL512599.1-201ENST00000430724 685 ntBASIC15.55■□□□□ 0.08
TIMP1P01033 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
TIMP1P01033 PRSS3P1-201ENST00000503996 742 ntBASIC15.55■□□□□ 0.08
TIMP1P01033 KNOP1P1-201ENST00000542108 989 ntBASIC15.55■□□□□ 0.08
TIMP1P01033 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.55■□□□□ 0.08
TIMP1P01033 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
TIMP1P01033 AC018846.1-201ENST00000568231 183 ntBASIC15.55■□□□□ 0.08
TIMP1P01033 MIR4265-201ENST00000582152 99 ntBASIC15.55■□□□□ 0.08
TIMP1P01033 FTLP5-201ENST00000586853 534 ntBASIC15.55■□□□□ 0.08
TIMP1P01033 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC15.55■□□□□ 0.08
TIMP1P01033 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TIMP1P01033 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.55■□□□□ 0.08
TIMP1P01033 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TIMP1P01033 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMP1P01033 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TIMP1P01033 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TIMP1P01033 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TIMP1P01033 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TIMP1P01033 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TIMP1P01033 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 RNLS-203ENST00000437752 525 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.54■□□□□ 0.08
TIMP1P01033 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.54■□□□□ 0.08
TIMP1P01033 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC15.54■□□□□ 0.08
TIMP1P01033 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 EEF1GP8-201ENST00000506566 1154 ntBASIC15.54■□□□□ 0.08
TIMP1P01033 RN7SKP155-201ENST00000516031 288 ntBASIC15.54■□□□□ 0.08
TIMP1P01033 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC15.54■□□□□ 0.08
TIMP1P01033 F11R-204ENST00000537746 1245 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 AL132994.1-201ENST00000554098 400 ntBASIC15.54■□□□□ 0.08
TIMP1P01033 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 RN7SL121P-201ENST00000584223 273 ntBASIC15.54■□□□□ 0.08
TIMP1P01033 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC15.54■□□□□ 0.08
TIMP1P01033 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.54■□□□□ 0.08
TIMP1P01033 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.54■□□□□ 0.08
TIMP1P01033 ACE3P-201ENST00000423435 1973 ntBASIC15.54■□□□□ 0.08
TIMP1P01033 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TIMP1P01033 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
TIMP1P01033 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMP1P01033 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMP1P01033 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMP1P01033 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 PCDHA1-201ENST00000378133 2726 ntBASIC15.53■□□□□ 0.08
TIMP1P01033 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMP1P01033 KRT8P18-201ENST00000413425 1445 ntBASIC15.53■□□□□ 0.08
TIMP1P01033 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMP1P01033 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 FKBP4P8-201ENST00000610931 1369 ntBASIC15.53■□□□□ 0.08
TIMP1P01033 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms