Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MBD4O95243 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MBD4O95243 AL021578.1-201ENST00000613646 709 ntBASIC17.45■□□□□ 0.38
MBD4O95243 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MBD4O95243 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
MBD4O95243 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MBD4O95243 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD4O95243 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MBD4O95243 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MBD4O95243 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MBD4O95243 AC008132.1-202ENST00000342005 1389 ntBASIC17.44■□□□□ 0.38
MBD4O95243 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 MIR769-201ENST00000390225 118 ntBASIC17.44■□□□□ 0.38
MBD4O95243 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
MBD4O95243 XBP1P1-201ENST00000436573 652 ntBASIC17.44■□□□□ 0.38
MBD4O95243 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD4O95243 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.44■□□□□ 0.38
MBD4O95243 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
MBD4O95243 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.44■□□□□ 0.38
MBD4O95243 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.44■□□□□ 0.38
MBD4O95243 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.44■□□□□ 0.38
MBD4O95243 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD4O95243 AC100757.4-201ENST00000626934 759 ntBASIC17.44■□□□□ 0.38
MBD4O95243 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD4O95243 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MBD4O95243 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 AL157791.1-201ENST00000553667 1699 ntBASIC17.44■□□□□ 0.38
MBD4O95243 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 AC232323.1-201ENST00000540724 2099 ntBASIC17.44■□□□□ 0.38
MBD4O95243 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
MBD4O95243 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.44■□□□□ 0.38
MBD4O95243 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
MBD4O95243 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
MBD4O95243 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MBD4O95243 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD4O95243 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 AC011498.7-201ENST00000624986 2027 ntBASIC17.43■□□□□ 0.38
MBD4O95243 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.43■□□□□ 0.38
MBD4O95243 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD4O95243 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD4O95243 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MBD4O95243 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD4O95243 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
MBD4O95243 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.43■□□□□ 0.38
MBD4O95243 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MBD4O95243 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 ST13P19-201ENST00000442505 1124 ntBASIC17.43■□□□□ 0.38
MBD4O95243 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.43■□□□□ 0.38
MBD4O95243 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.43■□□□□ 0.38
MBD4O95243 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
MBD4O95243 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.43■□□□□ 0.38
MBD4O95243 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
MBD4O95243 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.43■□□□□ 0.38
MBD4O95243 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
MBD4O95243 AP001505.2-201ENST00000616815 443 ntBASIC17.43■□□□□ 0.38
MBD4O95243 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.43■□□□□ 0.38
MBD4O95243 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD4O95243 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD4O95243 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MBD4O95243 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MBD4O95243 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD4O95243 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MBD4O95243 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD4O95243 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MBD4O95243 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms