Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC6.33□□□□□ -1.4
USH2AO75445 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 POP5-201ENST00000341039 913 ntTSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC6.32□□□□□ -1.4
USH2AO75445 CNN2P1-201ENST00000453616 918 ntBASIC6.32□□□□□ -1.4
USH2AO75445 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC6.32□□□□□ -1.4
USH2AO75445 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 AC097474.1-201ENST00000506481 1371 ntBASIC6.32□□□□□ -1.4
USH2AO75445 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 STK33-217ENST00000534493 1895 ntTSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 NME2-201ENST00000393183 568 ntTSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC6.32□□□□□ -1.4
USH2AO75445 BAK1P2-201ENST00000532665 631 ntBASIC6.32□□□□□ -1.4
USH2AO75445 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
USH2AO75445 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 AC005777.1-201ENST00000588332 187 ntBASIC6.32□□□□□ -1.4
USH2AO75445 AC139100.2-201ENST00000616901 662 ntBASIC6.32□□□□□ -1.4
USH2AO75445 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 WARS-232ENST00000556645 2508 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 CEP83-AS1-201ENST00000623122 2482 ntBASIC6.32□□□□□ -1.4
USH2AO75445 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC6.32□□□□□ -1.4
USH2AO75445 FAM213AP2-201ENST00000521579 683 ntBASIC6.32□□□□□ -1.4
USH2AO75445 AP001979.1-201ENST00000529222 751 ntBASIC6.32□□□□□ -1.4
USH2AO75445 METTL7AP1-201ENST00000547343 496 ntBASIC6.32□□□□□ -1.4
USH2AO75445 AL357137.1-201ENST00000604645 203 ntBASIC6.32□□□□□ -1.4
USH2AO75445 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
USH2AO75445 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
USH2AO75445 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
USH2AO75445 AL031673.1-201ENST00000611460 466 ntBASIC6.32□□□□□ -1.4
USH2AO75445 ESR1-214ENST00000638569 132 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
USH2AO75445 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
USH2AO75445 AC091951.1-201ENST00000512854 2465 ntBASIC6.32□□□□□ -1.4
USH2AO75445 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USH2AO75445 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms