Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 AC106794.1-201ENST00000506935 792 ntBASIC14.83□□□□□ -0.04
PRAMEF11O60813 AC044849.1-201ENST00000519737 1188 ntBASIC14.83□□□□□ -0.04
PRAMEF11O60813 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 AC003686.1-201ENST00000550956 1034 ntBASIC14.83□□□□□ -0.04
PRAMEF11O60813 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 AC090164.2-201ENST00000611487 516 ntBASIC14.83□□□□□ -0.04
PRAMEF11O60813 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.83□□□□□ -0.04
PRAMEF11O60813 MIR6799-201ENST00000620297 69 ntBASIC14.83□□□□□ -0.04
PRAMEF11O60813 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 AC012617.1-204ENST00000586340 2305 ntBASIC14.83□□□□□ -0.04
PRAMEF11O60813 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF11O60813 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.83□□□□□ -0.04
PRAMEF11O60813 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 KRT18P36-201ENST00000411618 1276 ntBASIC14.82□□□□□ -0.04
PRAMEF11O60813 NKAIN1P1-201ENST00000435754 582 ntBASIC14.82□□□□□ -0.04
PRAMEF11O60813 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 AC005740.2-201ENST00000511085 419 ntBASIC14.82□□□□□ -0.04
PRAMEF11O60813 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 AC005089.1-201ENST00000619486 2241 ntBASIC14.82□□□□□ -0.04
PRAMEF11O60813 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF11O60813 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.82□□□□□ -0.04
PRAMEF11O60813 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRAMEF11O60813 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.81□□□□□ -0.04
PRAMEF11O60813 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PRAMEF11O60813 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRAMEF11O60813 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PRAMEF11O60813 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PRAMEF11O60813 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.81□□□□□ -0.04
PRAMEF11O60813 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRAMEF11O60813 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PRAMEF11O60813 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRAMEF11O60813 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRAMEF11O60813 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRAMEF11O60813 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRAMEF11O60813 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.81□□□□□ -0.04
PRAMEF11O60813 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms