Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC3O60481 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC3O60481 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC3O60481 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ZIC3O60481 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.16□□□□□ -0.3
ZIC3O60481 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ZIC3O60481 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.16□□□□□ -0.3
ZIC3O60481 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.16□□□□□ -0.3
ZIC3O60481 AL008707.1-201ENST00000422498 534 ntBASIC13.16□□□□□ -0.3
ZIC3O60481 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 XBP1P1-201ENST00000436573 652 ntBASIC13.16□□□□□ -0.3
ZIC3O60481 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.16□□□□□ -0.3
ZIC3O60481 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.16□□□□□ -0.3
ZIC3O60481 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.16□□□□□ -0.3
ZIC3O60481 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.16□□□□□ -0.3
ZIC3O60481 AC005586.2-201ENST00000563946 837 ntBASIC13.16□□□□□ -0.3
ZIC3O60481 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 NDUFV2P1-201ENST00000596415 907 ntBASIC13.16□□□□□ -0.3
ZIC3O60481 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.16□□□□□ -0.3
ZIC3O60481 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ZIC3O60481 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.16□□□□□ -0.3
ZIC3O60481 AL139099.5-201ENST00000635274 300 ntBASIC13.16□□□□□ -0.3
ZIC3O60481 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 AL805961.1-203ENST00000641078 1258 ntBASIC13.16□□□□□ -0.3
ZIC3O60481 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ZIC3O60481 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ZIC3O60481 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC3O60481 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ZIC3O60481 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.16□□□□□ -0.3
ZIC3O60481 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ZIC3O60481 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.15□□□□□ -0.3
ZIC3O60481 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
ZIC3O60481 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ZIC3O60481 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.15□□□□□ -0.3
ZIC3O60481 AC015656.1-201ENST00000624209 3578 ntBASIC13.15□□□□□ -0.3
ZIC3O60481 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ZIC3O60481 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 RN7SL832P-201ENST00000607781 1756 ntBASIC13.15□□□□□ -0.3
ZIC3O60481 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.15□□□□□ -0.3
ZIC3O60481 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 RN7SKP214-201ENST00000364208 315 ntBASIC13.15□□□□□ -0.3
ZIC3O60481 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
ZIC3O60481 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
ZIC3O60481 AL161932.2-201ENST00000435436 679 ntBASIC13.15□□□□□ -0.3
ZIC3O60481 AC011742.3-201ENST00000439053 820 ntBASIC13.15□□□□□ -0.3
ZIC3O60481 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 AC005077.2-201ENST00000449786 690 ntBASIC13.15□□□□□ -0.3
ZIC3O60481 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.15□□□□□ -0.3
ZIC3O60481 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
ZIC3O60481 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.15□□□□□ -0.3
ZIC3O60481 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.15□□□□□ -0.3
ZIC3O60481 RN7SL774P-201ENST00000577467 290 ntBASIC13.15□□□□□ -0.3
ZIC3O60481 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 AC100757.4-201ENST00000626934 759 ntBASIC13.15□□□□□ -0.3
ZIC3O60481 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ZIC3O60481 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms