Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RIPK2O43353 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RIPK2O43353 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.95□□□□□ -0.02
RIPK2O43353 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
RIPK2O43353 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 AC135782.3-201ENST00000562782 2105 ntBASIC14.95□□□□□ -0.02
RIPK2O43353 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RIPK2O43353 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.95□□□□□ -0.02
RIPK2O43353 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RIPK2O43353 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RIPK2O43353 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
RIPK2O43353 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 Z82170.1-201ENST00000625081 3192 ntBASIC14.94□□□□□ -0.02
RIPK2O43353 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.94□□□□□ -0.02
RIPK2O43353 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.94□□□□□ -0.02
RIPK2O43353 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.94□□□□□ -0.02
RIPK2O43353 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RIPK2O43353 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.94□□□□□ -0.02
RIPK2O43353 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RIPK2O43353 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 MIR497HG-202ENST00000572453 3838 ntBASIC14.94□□□□□ -0.02
RIPK2O43353 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.94□□□□□ -0.02
RIPK2O43353 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.94□□□□□ -0.02
RIPK2O43353 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RIPK2O43353 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.94□□□□□ -0.02
RIPK2O43353 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIPK2O43353 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RIPK2O43353 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RIPK2O43353 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.93□□□□□ -0.02
RIPK2O43353 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RIPK2O43353 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.93□□□□□ -0.02
RIPK2O43353 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.93□□□□□ -0.02
RIPK2O43353 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RIPK2O43353 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.93□□□□□ -0.02
RIPK2O43353 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.93□□□□□ -0.02
RIPK2O43353 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.93□□□□□ -0.02
RIPK2O43353 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.93□□□□□ -0.02
RIPK2O43353 AP006288.1-201ENST00000446065 395 ntBASIC14.93□□□□□ -0.02
RIPK2O43353 AP001582.1-201ENST00000525856 295 ntBASIC14.93□□□□□ -0.02
RIPK2O43353 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.93□□□□□ -0.02
RIPK2O43353 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.93□□□□□ -0.02
RIPK2O43353 AC120045.2-201ENST00000567334 178 ntBASIC14.93□□□□□ -0.02
RIPK2O43353 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.93□□□□□ -0.02
RIPK2O43353 AC015911.4-201ENST00000588022 1070 ntBASIC14.93□□□□□ -0.02
RIPK2O43353 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.93□□□□□ -0.02
RIPK2O43353 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.93□□□□□ -0.02
RIPK2O43353 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 AC004840.1-201ENST00000636359 365 ntBASIC14.93□□□□□ -0.02
RIPK2O43353 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIPK2O43353 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RIPK2O43353 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms