Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 AC011474.4-201ENST00000623523 2076 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.09□□□□□ -0.63
SOCS3O14543 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
SOCS3O14543 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.09□□□□□ -0.63
SOCS3O14543 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.09□□□□□ -0.63
SOCS3O14543 AC004945.1-201ENST00000416738 983 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 CD8B2-202ENST00000417670 633 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 TMEM14DP-201ENST00000422205 345 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 FAM197Y7-201ENST00000432892 766 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 TTTY23B-201ENST00000442790 549 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 BCRP2-202ENST00000447763 634 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 FTH1P14-201ENST00000482930 551 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.09□□□□□ -0.63
SOCS3O14543 BCRP6-201ENST00000510112 632 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 BCRP7-201ENST00000511549 544 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.09□□□□□ -0.63
SOCS3O14543 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.09□□□□□ -0.63
SOCS3O14543 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.09□□□□□ -0.63
SOCS3O14543 OR10B1P-201ENST00000601666 907 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 AL022328.1-201ENST00000610050 478 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 BEND3P1-201ENST00000421591 1944 ntBASIC11.09□□□□□ -0.63
SOCS3O14543 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SOCS3O14543 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SOCS3O14543 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SOCS3O14543 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.09□□□□□ -0.63
SOCS3O14543 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SOCS3O14543 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SOCS3O14543 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
SOCS3O14543 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.08□□□□□ -0.64
SOCS3O14543 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.08□□□□□ -0.64
SOCS3O14543 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SOCS3O14543 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.08□□□□□ -0.64
SOCS3O14543 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SOCS3O14543 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.08□□□□□ -0.64
SOCS3O14543 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SOCS3O14543 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SOCS3O14543 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.08□□□□□ -0.64
SOCS3O14543 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 KRT8P28-201ENST00000433288 1390 ntBASIC11.08□□□□□ -0.64
SOCS3O14543 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SOCS3O14543 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.08□□□□□ -0.64
SOCS3O14543 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 AL512384.1-201ENST00000406683 331 ntBASIC11.08□□□□□ -0.64
SOCS3O14543 FAM8A4P-201ENST00000435433 1213 ntBASIC11.08□□□□□ -0.64
SOCS3O14543 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.08□□□□□ -0.64
SOCS3O14543 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC11.08□□□□□ -0.64
SOCS3O14543 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.08□□□□□ -0.64
SOCS3O14543 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SOCS3O14543 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms