Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 HSD3BP1-201ENST00000286193 1111 ntBASIC17.78■□□□□ 0.44
RGPD3A6NKT7 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 RN7SL134P-201ENST00000579756 303 ntBASIC17.78■□□□□ 0.44
RGPD3A6NKT7 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 AL139158.3-201ENST00000641212 1562 ntBASIC17.78■□□□□ 0.44
RGPD3A6NKT7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.78■□□□□ 0.44
RGPD3A6NKT7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 CCL19-202ENST00000378800 414 ntTSL 2 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 AC079325.1-201ENST00000430386 857 ntBASIC17.77■□□□□ 0.44
RGPD3A6NKT7 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 NAT9-204ENST00000578822 839 ntTSL 3 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 AC008622.3-201ENST00000621170 600 ntBASIC17.77■□□□□ 0.44
RGPD3A6NKT7 AC138627.1-201ENST00000641127 1257 ntBASIC17.77■□□□□ 0.44
RGPD3A6NKT7 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.77■□□□□ 0.44
RGPD3A6NKT7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.77■□□□□ 0.43
RGPD3A6NKT7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RGPD3A6NKT7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
RGPD3A6NKT7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.77■□□□□ 0.43
RGPD3A6NKT7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RGPD3A6NKT7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
RGPD3A6NKT7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RGPD3A6NKT7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
RGPD3A6NKT7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RGPD3A6NKT7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.77■□□□□ 0.43
RGPD3A6NKT7 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 SNU13-204ENST00000402458 462 ntTSL 3 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 UGT1A12P-201ENST00000447084 853 ntBASIC17.76■□□□□ 0.43
RGPD3A6NKT7 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 RN7SL202P-201ENST00000584410 262 ntBASIC17.76■□□□□ 0.43
RGPD3A6NKT7 AC063977.2-201ENST00000601996 421 ntBASIC17.76■□□□□ 0.43
RGPD3A6NKT7 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 MIR6074-201ENST00000612054 107 ntBASIC17.76■□□□□ 0.43
RGPD3A6NKT7 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC17.76■□□□□ 0.43
RGPD3A6NKT7 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC17.76■□□□□ 0.43
RGPD3A6NKT7 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms