Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 AC007967.2-201ENST00000432613 625 ntBASIC10.33□□□□□ -0.76
LINC01546A6NGU7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 FAAHP1-202ENST00000446499 1238 ntBASIC10.33□□□□□ -0.76
LINC01546A6NGU7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 KRT18P21-201ENST00000515767 1272 ntBASIC10.33□□□□□ -0.76
LINC01546A6NGU7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 AC027237.1-201ENST00000560942 655 ntBASIC10.33□□□□□ -0.76
LINC01546A6NGU7 AL589739.1-201ENST00000607720 493 ntBASIC10.33□□□□□ -0.76
LINC01546A6NGU7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 F10-203ENST00000409306 1450 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 AC025183.3-201ENST00000623526 1482 ntBASIC10.32□□□□□ -0.76
LINC01546A6NGU7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 ALG3P1-201ENST00000508806 1114 ntBASIC10.32□□□□□ -0.76
LINC01546A6NGU7 SDHAP3-202ENST00000515467 728 ntBASIC10.32□□□□□ -0.76
LINC01546A6NGU7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 AC107373.2-201ENST00000607735 490 ntBASIC10.32□□□□□ -0.76
LINC01546A6NGU7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms