Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC21.29■■□□□ 1
HFM1A2PYH4 SIGLEC18P-201ENST00000602271 909 ntBASIC21.29■■□□□ 1
HFM1A2PYH4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC21.29■■□□□ 1
HFM1A2PYH4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC21.29■■□□□ 1
HFM1A2PYH4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HFM1A2PYH4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC21.29■■□□□ 1
HFM1A2PYH4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC21.29■■□□□ 1
HFM1A2PYH4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
HFM1A2PYH4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HFM1A2PYH4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC21.29■■□□□ 1
HFM1A2PYH4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC21.29■■□□□ 1
HFM1A2PYH4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC21.29■■□□□ 1
HFM1A2PYH4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 HSPA7-201ENST00000445535 1927 ntBASIC21.29■■□□□ 1
HFM1A2PYH4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HFM1A2PYH4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 AL807761.2-201ENST00000422849 729 ntBASIC21.29■■□□□ 1
HFM1A2PYH4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC21.29■■□□□ 1
HFM1A2PYH4 ORAOV1P1-201ENST00000503108 395 ntBASIC21.29■■□□□ 1
HFM1A2PYH4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC21.29■■□□□ 1
HFM1A2PYH4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC21.29■■□□□ 1
HFM1A2PYH4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
HFM1A2PYH4 NDUFB10P1-201ENST00000567319 521 ntBASIC21.29■■□□□ 1
HFM1A2PYH4 AC007326.1-201ENST00000604539 458 ntBASIC21.29■■□□□ 1
HFM1A2PYH4 LINC02228-204ENST00000642115 2962 ntBASIC21.29■■□□□ 1
HFM1A2PYH4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HFM1A2PYH4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HFM1A2PYH4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC21.28■■□□□ 1
HFM1A2PYH4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC21.28■■□□□ 1
HFM1A2PYH4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HFM1A2PYH4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HFM1A2PYH4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC21.28■■□□□ 1
HFM1A2PYH4 FGFR3P1-201ENST00000449999 601 ntBASIC21.28■■□□□ 1
HFM1A2PYH4 MRPL22P1-201ENST00000505398 616 ntBASIC21.28■■□□□ 1
HFM1A2PYH4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC21.28■■□□□ 1
HFM1A2PYH4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC21.28■■□□□ 1
HFM1A2PYH4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC21.28■■□□□ 1
HFM1A2PYH4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC21.28■■□□□ 1
HFM1A2PYH4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC21.28■■□□□ 1
HFM1A2PYH4 RN7SL455P-201ENST00000580629 282 ntBASIC21.28■■□□□ 1
HFM1A2PYH4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HFM1A2PYH4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HFM1A2PYH4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC21.28■■□□□ 1
HFM1A2PYH4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HFM1A2PYH4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
HFM1A2PYH4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC21.27■■□□□ 1
HFM1A2PYH4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HFM1A2PYH4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
HFM1A2PYH4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC21.27■■□□□ 1
HFM1A2PYH4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HFM1A2PYH4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HFM1A2PYH4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
HFM1A2PYH4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HFM1A2PYH4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HFM1A2PYH4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC21.27■■□□□ 1
HFM1A2PYH4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HFM1A2PYH4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
HFM1A2PYH4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC21.27■■□□□ 1
HFM1A2PYH4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC21.27■■□□□ 1
HFM1A2PYH4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC21.27■■□□□ 1
HFM1A2PYH4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
HFM1A2PYH4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HFM1A2PYH4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC21.27■■□□□ 1
HFM1A2PYH4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC21.27■■□□□ 1
HFM1A2PYH4 AL512306.1-201ENST00000432698 848 ntBASIC21.27■■□□□ 1
HFM1A2PYH4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC21.27■■□□□ 1
HFM1A2PYH4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HFM1A2PYH4 FOS-204ENST00000554617 796 ntTSL 2 BASIC21.27■■□□□ 1
HFM1A2PYH4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC21.27■■□□□ 1
HFM1A2PYH4 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC21.27■■□□□ 1
HFM1A2PYH4 RN7SL665P-201ENST00000578793 300 ntBASIC21.27■■□□□ 1
HFM1A2PYH4 AL133467.4-201ENST00000602953 725 ntBASIC21.27■■□□□ 1
HFM1A2PYH4 AC103691.2-201ENST00000618824 433 ntBASIC21.27■■□□□ 1
HFM1A2PYH4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC21.27■■□□□ 1
HFM1A2PYH4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC21.27■■□□□ 1
HFM1A2PYH4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HFM1A2PYH4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms