Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 CYP4F36P-201ENST00000589193 186 ntBASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 AP005264.5-201ENST00000590066 467 ntBASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 AL139339.2-201ENST00000608063 657 ntBASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC091769.1-201ENST00000619576 568 ntBASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 CCT8L1P-201ENST00000465400 1674 ntBASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC026470.1-201ENST00000478038 846 ntBASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC008026.2-201ENST00000495438 348 ntBASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC090136.2-201ENST00000517809 420 ntBASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 MT2A-202ENST00000561491 581 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 RPS5-204ENST00000598098 536 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC148477.9-201ENST00000623974 539 ntBASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC102724428A0A0B4J2F2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 MIR1301-201ENST00000408518 82 ntBASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 OR51A9P-201ENST00000422578 911 ntBASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 CHCHD2P2-201ENST00000503744 321 ntBASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 GDNF-207ENST00000515058 764 ntTSL 5 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 FOXN3-AS2-201ENST00000554071 1262 ntBASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 AL359091.4-201ENST00000610052 409 ntBASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 ODCP-201ENST00000459650 1639 ntBASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC102724428A0A0B4J2F2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms