Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 RN7SL832P-201ENST00000607781 1756 ntBASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 TMBIM7P-202ENST00000641474 1516 ntBASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 MIR1908-201ENST00000410394 80 ntBASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 BTBD6P1-201ENST00000412176 1267 ntBASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 AL645933.1-201ENST00000440087 609 ntBASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 AC027601.5-201ENST00000624065 2482 ntBASIC13.61□□□□□ -0.23
DTX4Q9Y2E6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 AC018735.1-201ENST00000437208 1502 ntBASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 MIR663B-201ENST00000408361 115 ntBASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 AL157407.1-201ENST00000435784 904 ntBASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 AL035414.1-201ENST00000451327 857 ntBASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 AL591846.1-201ENST00000451736 433 ntBASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 MIR6720-201ENST00000611664 98 ntBASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
DTX4Q9Y2E6 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
DTX4Q9Y2E6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms