Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 AC104109.2-201ENST00000602919 1418 ntBASIC13.17□□□□□ -0.3
SSR3Q9UNL2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 HLA-K-203ENST00000430151 1046 ntBASIC13.17□□□□□ -0.3
SSR3Q9UNL2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 MTND6P24-201ENST00000440466 518 ntBASIC13.17□□□□□ -0.3
SSR3Q9UNL2 AL592309.1-201ENST00000443127 649 ntBASIC13.17□□□□□ -0.3
SSR3Q9UNL2 AC079781.3-201ENST00000449110 356 ntBASIC13.17□□□□□ -0.3
SSR3Q9UNL2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 TIMM8BP1-201ENST00000452384 211 ntBASIC13.17□□□□□ -0.3
SSR3Q9UNL2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 AC092902.6-201ENST00000641783 218 ntBASIC13.17□□□□□ -0.3
SSR3Q9UNL2 AC092865.6-201ENST00000642101 219 ntBASIC13.17□□□□□ -0.3
SSR3Q9UNL2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 AL035456.1-201ENST00000456064 1369 ntBASIC13.17□□□□□ -0.3
SSR3Q9UNL2 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SSR3Q9UNL2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AL118506.1-201ENST00000601296 3082 ntBASIC13.16□□□□□ -0.3
SSR3Q9UNL2 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 SERBP1P3-201ENST00000459980 809 ntBASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AC069335.1-201ENST00000489972 472 ntBASIC13.16□□□□□ -0.3
SSR3Q9UNL2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AC145285.3-201ENST00000564603 959 ntBASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AC025048.3-201ENST00000590609 569 ntBASIC13.16□□□□□ -0.3
SSR3Q9UNL2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AC005702.4-201ENST00000618393 416 ntBASIC13.16□□□□□ -0.3
SSR3Q9UNL2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSR3Q9UNL2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms