Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN11AQ9UI33 AL031673.1-201ENST00000611460 466 ntBASIC18.32■□□□□ 0.52
SCN11AQ9UI33 AL451007.2-201ENST00000632004 563 ntBASIC18.32■□□□□ 0.52
SCN11AQ9UI33 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 AL672207.1-201ENST00000328462 1570 ntBASIC18.31■□□□□ 0.52
SCN11AQ9UI33 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 AC007952.5-201ENST00000572818 1486 ntBASIC18.31■□□□□ 0.52
SCN11AQ9UI33 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 GAS7-216ENST00000583882 553 ntTSL 5 BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 FO393412.1-201ENST00000619841 382 ntBASIC18.31■□□□□ 0.52
SCN11AQ9UI33 AC138466.4-201ENST00000623965 852 ntBASIC18.31■□□□□ 0.52
SCN11AQ9UI33 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCN11AQ9UI33 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 AL135901.1-201ENST00000451812 333 ntBASIC18.3■□□□□ 0.52
SCN11AQ9UI33 HINT1-205ENST00000508488 703 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 AL365181.1-201ENST00000564032 1828 ntBASIC18.3■□□□□ 0.52
SCN11AQ9UI33 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 AL390755.1-201ENST00000623716 2027 ntBASIC18.3■□□□□ 0.52
SCN11AQ9UI33 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 COX20P1-201ENST00000366529 357 ntBASIC18.3■□□□□ 0.52
SCN11AQ9UI33 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 KRT18P15-201ENST00000458108 1291 ntBASIC18.3■□□□□ 0.52
SCN11AQ9UI33 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 AC106047.2-201ENST00000511723 743 ntBASIC18.3■□□□□ 0.52
SCN11AQ9UI33 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 RPS5-204ENST00000598098 536 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN11AQ9UI33 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 AC004554.1-201ENST00000422830 1468 ntBASIC18.29■□□□□ 0.52
SCN11AQ9UI33 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 PRSS3P1-201ENST00000503996 742 ntBASIC18.29■□□□□ 0.52
SCN11AQ9UI33 GOLGA2P8-201ENST00000505201 779 ntBASIC18.29■□□□□ 0.52
SCN11AQ9UI33 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 HSPA8P5-201ENST00000456928 2069 ntBASIC18.29■□□□□ 0.52
SCN11AQ9UI33 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN11AQ9UI33 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms