Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.47■□□□□ 0.39
CLIP2Q9UDT6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIP2Q9UDT6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.47■□□□□ 0.39
CLIP2Q9UDT6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIP2Q9UDT6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIP2Q9UDT6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
CLIP2Q9UDT6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.47■□□□□ 0.39
CLIP2Q9UDT6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIP2Q9UDT6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLIP2Q9UDT6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLIP2Q9UDT6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIP2Q9UDT6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 INTS4P1-203ENST00000641008 3683 ntBASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 BCYRN1-201ENST00000418539 200 ntBASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 TLE1P1-201ENST00000422965 589 ntBASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 FNTAP2-201ENST00000430308 634 ntBASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 AKR7A2P1-201ENST00000460134 915 ntBASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 AC021723.1-201ENST00000486306 515 ntBASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 SHC1P1-201ENST00000425230 1745 ntBASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 E2F3P2-201ENST00000447755 1422 ntBASIC17.46■□□□□ 0.39
CLIP2Q9UDT6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLIP2Q9UDT6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLIP2Q9UDT6 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 AC006504.5-208ENST00000588784 2401 ntBASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 AC044849.1-201ENST00000519737 1188 ntBASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 AL139099.5-201ENST00000635274 300 ntBASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLIP2Q9UDT6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIP2Q9UDT6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.44■□□□□ 0.38
CLIP2Q9UDT6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIP2Q9UDT6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms