Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 AC027612.2-202ENST00000445955 1199 ntBASIC13.41□□□□□ -0.26
DKK4Q9UBT3 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 AC113347.2-201ENST00000512350 279 ntBASIC13.41□□□□□ -0.26
DKK4Q9UBT3 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 AC087203.1-201ENST00000532111 1181 ntBASIC13.41□□□□□ -0.26
DKK4Q9UBT3 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 AC110057.1-201ENST00000636031 898 ntBASIC13.41□□□□□ -0.26
DKK4Q9UBT3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
DKK4Q9UBT3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AC138761.6-201ENST00000583997 1423 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AC019109.1-201ENST00000401725 1874 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AC087481.3-201ENST00000602886 1894 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AP000244.1-201ENST00000424582 201 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 RN7SL788P-201ENST00000460504 316 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AC092896.1-201ENST00000465850 380 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 SRP14-208ENST00000560773 468 ntTSL 3 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 RN7SL602P-201ENST00000578326 324 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 RN7SL718P-201ENST00000581254 303 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AC080013.5-201ENST00000607044 679 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AL009176.1-201ENST00000607876 650 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AC092135.3-201ENST00000624151 1846 ntBASIC13.4□□□□□ -0.26
DKK4Q9UBT3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DKK4Q9UBT3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
DKK4Q9UBT3 AC112693.3-201ENST00000624819 1983 ntBASIC13.4□□□□□ -0.27
DKK4Q9UBT3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 ODCP-201ENST00000459650 1639 ntBASIC13.39□□□□□ -0.27
DKK4Q9UBT3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms