Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL157791.1-201ENST00000553667 1699 ntBASIC13.52□□□□□ -0.25
LRFN1Q9P244 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 AC092135.3-201ENST00000624151 1846 ntBASIC13.51□□□□□ -0.25
LRFN1Q9P244 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 VDAC1P1-201ENST00000439229 848 ntBASIC13.51□□□□□ -0.25
LRFN1Q9P244 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 UPF3AP2-201ENST00000457924 1132 ntBASIC13.51□□□□□ -0.25
LRFN1Q9P244 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 AL132994.2-201ENST00000603120 687 ntBASIC13.51□□□□□ -0.25
LRFN1Q9P244 AC106872.11-201ENST00000605838 421 ntBASIC13.51□□□□□ -0.25
LRFN1Q9P244 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.51□□□□□ -0.25
LRFN1Q9P244 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRFN1Q9P244 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.5□□□□□ -0.25
LRFN1Q9P244 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.5□□□□□ -0.25
LRFN1Q9P244 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.5□□□□□ -0.25
LRFN1Q9P244 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LRFN1Q9P244 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.5□□□□□ -0.25
LRFN1Q9P244 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 RN7SKP214-201ENST00000364208 315 ntBASIC13.5□□□□□ -0.25
LRFN1Q9P244 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.5□□□□□ -0.25
LRFN1Q9P244 AL157407.1-201ENST00000435784 904 ntBASIC13.5□□□□□ -0.25
LRFN1Q9P244 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.5□□□□□ -0.25
LRFN1Q9P244 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRFN1Q9P244 RCC2P8-201ENST00000502779 1035 ntBASIC13.5□□□□□ -0.25
LRFN1Q9P244 SCARNA21-201ENST00000517026 139 ntBASIC13.5□□□□□ -0.25
LRFN1Q9P244 RHOQP1-201ENST00000555758 579 ntBASIC13.5□□□□□ -0.25
LRFN1Q9P244 AL160314.3-201ENST00000556041 767 ntBASIC13.5□□□□□ -0.25
LRFN1Q9P244 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.5□□□□□ -0.25
LRFN1Q9P244 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms