Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C12orf4Q9NQ89 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.93□□□□□ -0.34
C12orf4Q9NQ89 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 KRT18P64-201ENST00000434946 1219 ntBASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 RPL13P2-201ENST00000440687 659 ntBASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 AC023141.5-201ENST00000458585 616 ntBASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 AC018529.2-202ENST00000611482 3087 ntBASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
C12orf4Q9NQ89 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms