Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
POLR2J2Q9GZM3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 AC123567.1-201ENST00000548294 1261 ntBASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 AL359711.2-201ENST00000563105 872 ntBASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 AP001063.1-201ENST00000568332 529 ntBASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 AL136172.1-201ENST00000598590 1394 ntBASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 TCAF1P1-201ENST00000414990 2232 ntBASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
POLR2J2Q9GZM3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 AL138725.1-201ENST00000407347 1314 ntBASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 GNAQP1-201ENST00000444815 1067 ntBASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 SPTLC1P1-201ENST00000447199 261 ntBASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 MIR8072-201ENST00000614241 80 ntBASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
POLR2J2Q9GZM3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms