Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 KC6-207ENST00000600644 2311 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 TMEM14DP-201ENST00000422205 345 ntBASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 AC106886.1-201ENST00000568660 600 ntBASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 INE2-201ENST00000630399 1874 ntBASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 AL122018.1-201ENST00000446607 2310 ntBASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM55Q9BYV6 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 AGGF1P1-201ENST00000509500 2073 ntBASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 AC022210.1-201ENST00000449856 793 ntBASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 COL6A4P2-202ENST00000504443 2753 ntBASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM55Q9BYV6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM55Q9BYV6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.96□□□□□ -0.02
TRIM55Q9BYV6 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM55Q9BYV6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM55Q9BYV6 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 AC027612.1-201ENST00000445234 2395 ntBASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 MEP1AP4-201ENST00000423244 1087 ntBASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRIM55Q9BYV6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms