Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 AC126915.1-201ENST00000522847 1038 ntBASIC21.17■□□□□ 0.98
SIN3AQ96ST3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SIN3AQ96ST3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 AC020910.6-201ENST00000623084 1459 ntBASIC21.16■□□□□ 0.98
SIN3AQ96ST3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 AC006033.1-201ENST00000440505 426 ntBASIC21.16■□□□□ 0.98
SIN3AQ96ST3 TUBB8P8-201ENST00000458717 1058 ntBASIC21.16■□□□□ 0.98
SIN3AQ96ST3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 AC003686.1-201ENST00000550956 1034 ntBASIC21.16■□□□□ 0.98
SIN3AQ96ST3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIN3AQ96ST3 AC016397.2-201ENST00000624848 1985 ntBASIC21.16■□□□□ 0.98
SIN3AQ96ST3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 AGER-214ENST00000538695 487 ntTSL 2 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 AC090164.2-201ENST00000611487 516 ntBASIC21.15■□□□□ 0.98
SIN3AQ96ST3 AL023803.2-201ENST00000620080 638 ntBASIC21.15■□□□□ 0.98
SIN3AQ96ST3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 AC092299.1-201ENST00000632679 757 ntBASIC21.15■□□□□ 0.98
SIN3AQ96ST3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SIN3AQ96ST3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC21.14■□□□□ 0.98
SIN3AQ96ST3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SIN3AQ96ST3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIN3AQ96ST3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
SIN3AQ96ST3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIN3AQ96ST3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
SIN3AQ96ST3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SIN3AQ96ST3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIN3AQ96ST3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SIN3AQ96ST3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIN3AQ96ST3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC21.14■□□□□ 0.97
SIN3AQ96ST3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC21.14■□□□□ 0.97
SIN3AQ96ST3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC21.14■□□□□ 0.97
SIN3AQ96ST3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIN3AQ96ST3 HNRNPA1P32-201ENST00000396326 963 ntBASIC21.14■□□□□ 0.97
SIN3AQ96ST3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIN3AQ96ST3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC21.14■□□□□ 0.97
SIN3AQ96ST3 ATP6V0CP2-201ENST00000469409 207 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms