Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 NME2P1-201ENST00000426182 414 ntBASIC13.5□□□□□ -0.25
SNX18Q96RF0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 VDAC1P7-201ENST00000462417 847 ntBASIC13.5□□□□□ -0.25
SNX18Q96RF0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 AC007431.3-201ENST00000623221 587 ntBASIC13.5□□□□□ -0.25
SNX18Q96RF0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 AL137783.1-201ENST00000623494 1896 ntBASIC13.5□□□□□ -0.25
SNX18Q96RF0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 AC055811.4-201ENST00000624039 1754 ntBASIC13.5□□□□□ -0.25
SNX18Q96RF0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 AL118506.1-201ENST00000601296 3082 ntBASIC13.5□□□□□ -0.25
SNX18Q96RF0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 AC023090.2-201ENST00000625182 2110 ntBASIC13.49□□□□□ -0.25
SNX18Q96RF0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 AL139094.1-201ENST00000405549 1188 ntBASIC13.49□□□□□ -0.25
SNX18Q96RF0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 COX5BP8-201ENST00000416911 349 ntBASIC13.49□□□□□ -0.25
SNX18Q96RF0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 AC093004.1-201ENST00000508850 424 ntBASIC13.49□□□□□ -0.25
SNX18Q96RF0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 CR383656.12-201ENST00000549567 513 ntBASIC13.49□□□□□ -0.25
SNX18Q96RF0 AC023310.3-201ENST00000557027 670 ntBASIC13.49□□□□□ -0.25
SNX18Q96RF0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 AC100756.1-201ENST00000562736 682 ntBASIC13.49□□□□□ -0.25
SNX18Q96RF0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 AC138749.3-201ENST00000567691 622 ntBASIC13.49□□□□□ -0.25
SNX18Q96RF0 TP53TG3HP-202ENST00000569755 579 ntBASIC13.49□□□□□ -0.25
SNX18Q96RF0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 AC116165.1-201ENST00000611806 668 ntBASIC13.49□□□□□ -0.25
SNX18Q96RF0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms