Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 RN7SL530P-201ENST00000485097 298 ntBASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 AC087203.1-201ENST00000532111 1181 ntBASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 ERP29P1-201ENST00000442902 706 ntBASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 IFNL3P1-201ENST00000595082 501 ntBASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AC138761.6-201ENST00000583997 1423 ntBASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 HLA-DMA-202ENST00000395303 1007 ntBASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 BRD7P5-201ENST00000299197 1822 ntBASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AC091304.3-201ENST00000566500 716 ntBASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AC007250.1-201ENST00000608934 338 ntBASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 AL357143.1-203ENST00000639750 881 ntBASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.18□□□□□ -0.46
CSMD1Q96PZ7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 AC019109.1-201ENST00000401725 1874 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 THAP4-203ENST00000402545 833 ntTSL 5 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 AC025594.1-201ENST00000469533 543 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 RN7SL277P-201ENST00000481521 288 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 ALG1L15P-201ENST00000482834 794 ntBASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.17□□□□□ -0.46
CSMD1Q96PZ7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms