Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 XBP1P1-201ENST00000436573 652 ntBASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 OR2R1P-201ENST00000441404 914 ntBASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 MAGEA5-201ENST00000446757 942 ntBASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC85AQ96PX6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 AC007686.3-201ENST00000619017 3487 ntBASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 MTHFR-210ENST00000641407 2387 ntBASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 RN7SL67P-201ENST00000492147 296 ntBASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 MIR6769A-201ENST00000617340 73 ntBASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC85AQ96PX6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 PCDHA3-202ENST00000532566 4594 ntBASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 RNA5SP359-201ENST00000364838 113 ntBASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 AL627231.1-201ENST00000394467 1125 ntBASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 AC026320.2-201ENST00000434379 478 ntBASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms