Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 AC097376.2-205ENST00000610159 5334 ntBASIC17.21■□□□□ 0.35
TRIM47Q96LD4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 VDAC1P1-201ENST00000439229 848 ntBASIC17.21■□□□□ 0.35
TRIM47Q96LD4 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 MIR6756-201ENST00000616240 63 ntBASIC17.21■□□□□ 0.35
TRIM47Q96LD4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 ZBED1P1-201ENST00000502364 1930 ntBASIC17.21■□□□□ 0.35
TRIM47Q96LD4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM47Q96LD4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM47Q96LD4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM47Q96LD4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.21■□□□□ 0.34
TRIM47Q96LD4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM47Q96LD4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM47Q96LD4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TRIM47Q96LD4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 MROH4P-201ENST00000431302 1578 ntBASIC17.2■□□□□ 0.34
TRIM47Q96LD4 AL365209.1-201ENST00000624418 6473 ntBASIC17.2■□□□□ 0.34
TRIM47Q96LD4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 AC009093.2-202ENST00000620513 2079 ntBASIC17.2■□□□□ 0.34
TRIM47Q96LD4 REXO1L5P-201ENST00000622260 2098 ntBASIC17.2■□□□□ 0.34
TRIM47Q96LD4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM47Q96LD4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 AC013726.1-201ENST00000563747 2285 ntBASIC17.19■□□□□ 0.34
TRIM47Q96LD4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 INE2-201ENST00000630399 1874 ntBASIC17.19■□□□□ 0.34
TRIM47Q96LD4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM47Q96LD4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms