Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC4Q92889 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC4Q92889 AC215219.1-201ENST00000400706 1817 ntBASIC16.75■□□□□ 0.27
ERCC4Q92889 MYADML-201ENST00000474610 2147 ntBASIC16.75■□□□□ 0.27
ERCC4Q92889 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ERCC4Q92889 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ERCC4Q92889 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC4Q92889 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC4Q92889 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ERCC4Q92889 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 NUS1P3-201ENST00000423502 862 ntBASIC16.74■□□□□ 0.27
ERCC4Q92889 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 HMGN1P19-201ENST00000436976 333 ntBASIC16.74■□□□□ 0.27
ERCC4Q92889 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ERCC4Q92889 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ERCC4Q92889 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ERCC4Q92889 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ERCC4Q92889 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC4Q92889 AC123567.1-201ENST00000548294 1261 ntBASIC16.74■□□□□ 0.27
ERCC4Q92889 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC4Q92889 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC4Q92889 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ERCC4Q92889 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC4Q92889 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC4Q92889 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC4Q92889 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
ERCC4Q92889 AL136172.1-201ENST00000598590 1394 ntBASIC16.74■□□□□ 0.27
ERCC4Q92889 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC4Q92889 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC4Q92889 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC4Q92889 AC020910.5-201ENST00000623668 1865 ntBASIC16.73■□□□□ 0.27
ERCC4Q92889 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC4Q92889 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ERCC4Q92889 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ERCC4Q92889 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC4Q92889 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ERCC4Q92889 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC4Q92889 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ERCC4Q92889 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ERCC4Q92889 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC4Q92889 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 SPTLC1P1-201ENST00000447199 261 ntBASIC16.73■□□□□ 0.27
ERCC4Q92889 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
ERCC4Q92889 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.73■□□□□ 0.27
ERCC4Q92889 SERBP1P5-201ENST00000510079 1181 ntBASIC16.73■□□□□ 0.27
ERCC4Q92889 AC055876.2-201ENST00000531834 546 ntBASIC16.73■□□□□ 0.27
ERCC4Q92889 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.73■□□□□ 0.27
ERCC4Q92889 AC092552.1-201ENST00000547243 906 ntBASIC16.73■□□□□ 0.27
ERCC4Q92889 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC4Q92889 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC4Q92889 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC4Q92889 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC4Q92889 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ERCC4Q92889 AL137784.3-201ENST00000623858 2288 ntBASIC16.73■□□□□ 0.27
ERCC4Q92889 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ERCC4Q92889 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ERCC4Q92889 MSTO2P-201ENST00000314835 1709 ntBASIC16.73■□□□□ 0.27
ERCC4Q92889 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
ERCC4Q92889 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC4Q92889 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ERCC4Q92889 HSPA8P5-201ENST00000456928 2069 ntBASIC16.73■□□□□ 0.27
ERCC4Q92889 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC4Q92889 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC4Q92889 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC4Q92889 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC4Q92889 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC4Q92889 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ERCC4Q92889 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC4Q92889 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC4Q92889 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms