Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 TOMM22P5-201ENST00000416399 439 ntBASIC12.78□□□□□ -0.36
BEST4Q8NFU0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 AL589739.1-201ENST00000607720 493 ntBASIC12.78□□□□□ -0.36
BEST4Q8NFU0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 AL033527.5-202ENST00000641632 1098 ntBASIC12.78□□□□□ -0.36
BEST4Q8NFU0 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 AL360270.3-201ENST00000609118 1348 ntBASIC12.78□□□□□ -0.36
BEST4Q8NFU0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BEST4Q8NFU0 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 CETN4P-206ENST00000642099 2168 ntBASIC12.77□□□□□ -0.36
BEST4Q8NFU0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BEST4Q8NFU0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 AL627223.1-201ENST00000416693 442 ntBASIC12.77□□□□□ -0.37
BEST4Q8NFU0 AC004832.2-201ENST00000426397 482 ntBASIC12.77□□□□□ -0.37
BEST4Q8NFU0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 SPDYE14P-201ENST00000442619 822 ntBASIC12.77□□□□□ -0.37
BEST4Q8NFU0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 CEND1P1-201ENST00000451006 455 ntBASIC12.77□□□□□ -0.37
BEST4Q8NFU0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 MTDHP5-201ENST00000598980 586 ntBASIC12.77□□□□□ -0.37
BEST4Q8NFU0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 ELL2P1-201ENST00000413990 1906 ntBASIC12.77□□□□□ -0.37
BEST4Q8NFU0 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms