Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFX6Q8HWS3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RFX6Q8HWS3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RFX6Q8HWS3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RFX6Q8HWS3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RFX6Q8HWS3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RFX6Q8HWS3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
RFX6Q8HWS3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RFX6Q8HWS3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RFX6Q8HWS3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 AC138969.2-201ENST00000532739 9932 ntBASIC15.33■□□□□ 0.04
RFX6Q8HWS3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 BCRP2-202ENST00000447763 634 ntBASIC15.33■□□□□ 0.04
RFX6Q8HWS3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 BCRP6-201ENST00000510112 632 ntBASIC15.33■□□□□ 0.04
RFX6Q8HWS3 BCRP7-201ENST00000511549 544 ntBASIC15.33■□□□□ 0.04
RFX6Q8HWS3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 AC131212.3-201ENST00000624087 4219 ntBASIC15.33■□□□□ 0.04
RFX6Q8HWS3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RFX6Q8HWS3 AC011498.7-201ENST00000624986 2027 ntBASIC15.33■□□□□ 0.04
RFX6Q8HWS3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.32■□□□□ 0.04
RFX6Q8HWS3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 AL590640.2-201ENST00000457038 527 ntBASIC15.32■□□□□ 0.04
RFX6Q8HWS3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 SLC25A47P1-201ENST00000531577 414 ntBASIC15.32■□□□□ 0.04
RFX6Q8HWS3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 AC025279.2-201ENST00000569730 653 ntBASIC15.32■□□□□ 0.04
RFX6Q8HWS3 GNRHR2-203ENST00000581100 1187 ntBASIC15.32■□□□□ 0.04
RFX6Q8HWS3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RFX6Q8HWS3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms