Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 AC098614.1-201ENST00000368528 745 ntBASIC13.62□□□□□ -0.23
VRK2Q86Y07 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 RN7SKP175-201ENST00000408472 289 ntBASIC13.62□□□□□ -0.23
VRK2Q86Y07 HMGN1P19-201ENST00000436976 333 ntBASIC13.62□□□□□ -0.23
VRK2Q86Y07 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 AC106820.3-201ENST00000561653 397 ntBASIC13.62□□□□□ -0.23
VRK2Q86Y07 AC025279.2-201ENST00000569730 653 ntBASIC13.62□□□□□ -0.23
VRK2Q86Y07 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 MIR6074-201ENST00000612054 107 ntBASIC13.62□□□□□ -0.23
VRK2Q86Y07 AC025048.6-201ENST00000634326 1161 ntBASIC13.62□□□□□ -0.23
VRK2Q86Y07 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 AP000593.2-201ENST00000542775 1433 ntBASIC13.62□□□□□ -0.23
VRK2Q86Y07 BEND3P1-201ENST00000421591 1944 ntBASIC13.62□□□□□ -0.23
VRK2Q86Y07 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 HSPA8P5-201ENST00000456928 2069 ntBASIC13.62□□□□□ -0.23
VRK2Q86Y07 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.61□□□□□ -0.23
VRK2Q86Y07 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.61□□□□□ -0.23
VRK2Q86Y07 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 BCRP2-202ENST00000447763 634 ntBASIC13.61□□□□□ -0.23
VRK2Q86Y07 AC011495.1-201ENST00000498085 584 ntBASIC13.61□□□□□ -0.23
VRK2Q86Y07 BCRP6-201ENST00000510112 632 ntBASIC13.61□□□□□ -0.23
VRK2Q86Y07 BCRP7-201ENST00000511549 544 ntBASIC13.61□□□□□ -0.23
VRK2Q86Y07 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 SLC25A47P1-201ENST00000531577 414 ntBASIC13.61□□□□□ -0.23
VRK2Q86Y07 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms