Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC006213.4-201ENST00000616184 634 ntBASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 AL359183.1-201ENST00000623796 2132 ntBASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 REXO1L6P-201ENST00000603433 1515 ntBASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 AC015688.4-201ENST00000580780 1647 ntBASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 SHC1P1-201ENST00000425230 1745 ntBASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AGGF1P1-201ENST00000509500 2073 ntBASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 MIR326-201ENST00000362220 95 ntBASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AC079178.1-201ENST00000420915 656 ntBASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 RN7SL560P-201ENST00000577943 264 ntBASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AC107918.4-201ENST00000641966 3141 ntBASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LYSMD3Q7Z3D4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms