Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 DUX4L47-201ENST00000566374 394 ntBASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 AP001505.2-201ENST00000616815 443 ntBASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 AC018442.1-201ENST00000421439 2061 ntBASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 AC089987.1-201ENST00000551654 2209 ntBASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 TUBBP5-203ENST00000508529 1334 ntBASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 AC104457.1-201ENST00000401024 814 ntBASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 AC021723.1-201ENST00000486306 515 ntBASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 MESTP3-201ENST00000503460 968 ntBASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 AC091812.3-201ENST00000621362 345 ntBASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 CU633904.3-201ENST00000624042 1029 ntBASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC144BQ3MJ40 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 AC005740.2-201ENST00000511085 419 ntBASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 AC245884.6-201ENST00000515672 1067 ntBASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 AC022748.3-201ENST00000621828 275 ntBASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC144BQ3MJ40 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms