Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 AC027612.4-201ENST00000605371 583 ntBASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 AL589739.1-201ENST00000607720 493 ntBASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 CR383656.2-201ENST00000548656 2254 ntBASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
ANKRD55Q3KP44 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 GAPDHP40-201ENST00000505218 1006 ntBASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AC092364.2-202ENST00000597012 1073 ntBASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 MIR6074-201ENST00000612054 107 ntBASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AC093525.8-201ENST00000624099 1342 ntBASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ANKRD55Q3KP44 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 AC131212.3-201ENST00000624087 4219 ntBASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ANKRD55Q3KP44 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms