Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
EFNB3Q15768 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
EFNB3Q15768 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
EFNB3Q15768 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
EFNB3Q15768 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
EFNB3Q15768 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
EFNB3Q15768 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
EFNB3Q15768 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
EFNB3Q15768 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
EFNB3Q15768 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
EFNB3Q15768 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB3Q15768 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB3Q15768 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB3Q15768 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB3Q15768 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB3Q15768 AC006122.1-201ENST00000493323 440 ntBASIC12.53□□□□□ -0.4
EFNB3Q15768 RCC2P8-201ENST00000502779 1035 ntBASIC12.53□□□□□ -0.4
EFNB3Q15768 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB3Q15768 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.53□□□□□ -0.4
EFNB3Q15768 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB3Q15768 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB3Q15768 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB3Q15768 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
EFNB3Q15768 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.53□□□□□ -0.4
EFNB3Q15768 AC106872.11-201ENST00000605838 421 ntBASIC12.53□□□□□ -0.4
EFNB3Q15768 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB3Q15768 AC133540.1-201ENST00000620845 1019 ntBASIC12.53□□□□□ -0.4
EFNB3Q15768 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB3Q15768 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
EFNB3Q15768 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB3Q15768 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB3Q15768 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB3Q15768 KRT8P28-201ENST00000433288 1390 ntBASIC12.53□□□□□ -0.4
EFNB3Q15768 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
EFNB3Q15768 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
EFNB3Q15768 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 AC007686.3-201ENST00000619017 3487 ntBASIC12.53□□□□□ -0.4
EFNB3Q15768 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
EFNB3Q15768 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 AC139712.1-201ENST00000378256 1875 ntBASIC12.53□□□□□ -0.4
EFNB3Q15768 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB3Q15768 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB3Q15768 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
EFNB3Q15768 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB3Q15768 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB3Q15768 AL390755.1-201ENST00000623716 2027 ntBASIC12.52□□□□□ -0.4
EFNB3Q15768 AC007191.1-201ENST00000623179 2995 ntBASIC12.52□□□□□ -0.4
EFNB3Q15768 AC018442.1-201ENST00000421439 2061 ntBASIC12.52□□□□□ -0.4
EFNB3Q15768 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
EFNB3Q15768 LINC00552-201ENST00000625151 2579 ntBASIC12.52□□□□□ -0.4
EFNB3Q15768 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB3Q15768 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB3Q15768 AL157791.1-201ENST00000553667 1699 ntBASIC12.52□□□□□ -0.4
EFNB3Q15768 AC144522.1-201ENST00000625111 1658 ntBASIC12.52□□□□□ -0.4
EFNB3Q15768 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.52□□□□□ -0.4
EFNB3Q15768 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
EFNB3Q15768 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
EFNB3Q15768 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB3Q15768 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
EFNB3Q15768 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB3Q15768 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 Z97180.1-201ENST00000445173 988 ntBASIC12.52□□□□□ -0.41
EFNB3Q15768 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB3Q15768 RN7SL11P-201ENST00000471305 293 ntBASIC12.52□□□□□ -0.41
EFNB3Q15768 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB3Q15768 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB3Q15768 AL161670.2-201ENST00000557650 1227 ntBASIC12.52□□□□□ -0.41
EFNB3Q15768 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB3Q15768 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB3Q15768 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB3Q15768 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
EFNB3Q15768 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
EFNB3Q15768 AP001505.2-201ENST00000616815 443 ntBASIC12.52□□□□□ -0.41
EFNB3Q15768 CU633904.3-201ENST00000624042 1029 ntBASIC12.52□□□□□ -0.41
EFNB3Q15768 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
EFNB3Q15768 AC068587.10-201ENST00000641210 219 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms