Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 AL355102.3-201ENST00000554299 1678 ntBASIC12.46□□□□□ -0.41
SSBP1Q04837 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.46□□□□□ -0.41
SSBP1Q04837 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SSBP1Q04837 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 USP17L6P-201ENST00000382470 1197 ntBASIC12.46□□□□□ -0.41
SSBP1Q04837 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 AK2P2-201ENST00000439142 405 ntBASIC12.46□□□□□ -0.41
SSBP1Q04837 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.46□□□□□ -0.41
SSBP1Q04837 HLA-V-204ENST00000476601 1289 ntBASIC12.46□□□□□ -0.41
SSBP1Q04837 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.46□□□□□ -0.41
SSBP1Q04837 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.46□□□□□ -0.41
SSBP1Q04837 AC010336.2-201ENST00000564226 506 ntBASIC12.46□□□□□ -0.41
SSBP1Q04837 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.46□□□□□ -0.41
SSBP1Q04837 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.46□□□□□ -0.41
SSBP1Q04837 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.46□□□□□ -0.41
SSBP1Q04837 BAP1-211ENST00000615113 489 ntBASIC12.46□□□□□ -0.41
SSBP1Q04837 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.46□□□□□ -0.41
SSBP1Q04837 AL109936.8-201ENST00000641772 604 ntBASIC12.46□□□□□ -0.41
SSBP1Q04837 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP1Q04837 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP1Q04837 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SSBP1Q04837 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.46□□□□□ -0.42
SSBP1Q04837 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP1Q04837 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.46□□□□□ -0.42
SSBP1Q04837 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
SSBP1Q04837 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
SSBP1Q04837 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP1Q04837 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.46□□□□□ -0.42
SSBP1Q04837 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP1Q04837 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP1Q04837 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP1Q04837 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP1Q04837 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.46□□□□□ -0.42
SSBP1Q04837 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP1Q04837 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP1Q04837 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP1Q04837 AL359845.1-201ENST00000458202 1648 ntBASIC12.45□□□□□ -0.42
SSBP1Q04837 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
SSBP1Q04837 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SSBP1Q04837 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SSBP1Q04837 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
SSBP1Q04837 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP1Q04837 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP1Q04837 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 GCOM2-201ENST00000509133 1104 ntBASIC12.45□□□□□ -0.42
SSBP1Q04837 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP1Q04837 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.45□□□□□ -0.42
SSBP1Q04837 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP1Q04837 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.45□□□□□ -0.42
SSBP1Q04837 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP1Q04837 AC092337.1-201ENST00000568699 1129 ntBASIC12.45□□□□□ -0.42
SSBP1Q04837 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP1Q04837 AC093813.1-201ENST00000605066 256 ntBASIC12.45□□□□□ -0.42
SSBP1Q04837 AC107373.2-201ENST00000607735 490 ntBASIC12.45□□□□□ -0.42
SSBP1Q04837 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SSBP1Q04837 MIR6080-201ENST00000617359 66 ntBASIC12.45□□□□□ -0.42
SSBP1Q04837 AP001002.3-201ENST00000623482 206 ntBASIC12.45□□□□□ -0.42
SSBP1Q04837 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP1Q04837 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SSBP1Q04837 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP1Q04837 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SSBP1Q04837 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP1Q04837 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.45□□□□□ -0.42
SSBP1Q04837 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SSBP1Q04837 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP1Q04837 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SSBP1Q04837 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP1Q04837 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP1Q04837 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms